CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PARUW (Triosephosphate isomerase OS=Protochlamydia amoebophila (strain UWE25) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 84/228 (36.84%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R + GNWK T +E L F + VK +R + AQN GAFTGEI+ +M+ G +V+LGHSERR + E N F+ KV AL GL + CVGET E+R++G T ++ Q + +++ +++AYEPVWAIG G+ A P AQE+H RK + S E+A I YGGSVN +N L QPD+ Sbjct: 6 RPVVITGNWKMYKTVKEACTFAKALLP--VVEVSPIQVWIAVPFTAIYPVKQEIRNSRLVIGAQNMNDASEGAFTGEIAGKMVKEAGASFVLLGHSERRHLYKEDNAFINRKVKKALEIGLTPVLCVGETFEERKSGETQQIIRTQIQECLAGLTAEDLKTLIIAYEPVWAIGNGQNAKPEGAQEIHQFCRKIIKEIFSEELAEQIVIQYGGSVNPSNAISLLKQPDI 231
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 86/233 (36.91%), Postives = 116/233 (49.79%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L LG +V++GHSERR +E + V K A AL L I C+GE LE RE G + Q + +S N+V+ YEPVWAIGTG+VA+ A AQEV +RK L A SP++A R++YGGS+N N ++ AQ DV Sbjct: 1 MSRKSLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLTYGAQDLSQHDLGAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 82/232 (35.34%), Postives = 117/232 (50.43%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+LGI ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++ Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENI 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LACLA (Triosephosphate isomerase OS=Lactococcus lactis subsp. lactis GN=tpiA PE=1 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.684e-30 Identity = 80/229 (34.93%), Postives = 116/229 (50.66%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+LG+ ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A +S+ SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++ Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLSAEQVSNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENI 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_SACEN (Triosephosphate isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30 Identity = 95/239 (39.75%), Postives = 122/239 (51.05%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD---FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAG-----STMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R+ + GNWK N E V+KI L E F + V++ + D AQ+ + GA+TGE+S ML LG +V++GHSERR E++E V KV L G+ I CVGE LE REAG ST ++ A +++ +V+AYEPVWAIGTGKVAT A AQEV LR L EIA R++YGGSV +N EL Q DV Sbjct: 1 MARQPLIAGNWKMNLNHLEAIALVQKIAFSLPE---KYFAKVEVAVIPPFTDIRSVQTLIDGDKLLLKHGAQDVSEHESGAYTGEVSGPMLAKLGCSYVVVGHSERREHHAETDEVVNRKVRAVLKHGMSPILCVGEPLEVREAGGHVEHSTTQLINALKGLKTEQIRQ---VVVAYEPVWAIGTGKVATAADAQEVCAALRTALADKYGKEIADEVRVLYGGSVKSSNIGELIGQNDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LACLS (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tpiA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.200e-30 Identity = 81/232 (34.91%), Postives = 117/232 (50.43%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+LG+ ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++ Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENI 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_RALSO (Triosephosphate isomerase OS=Ralstonia solanacearum GN=tpiA PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.873e-30 Identity = 96/232 (41.38%), Postives = 120/232 (51.72%), Query Frame = 3 Query: 42 RKFFVGGNWKC----NGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHV-AAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R V GNWK NG E ++KI + GQ F +L +S L AQ+ + GAFTGE++A ML G + I+GHSERR E++ V K AL G+ I CVGETL QREAG T VVA Q +A+ + +S +IV+AYEPVWAIGTGK AT QAQ VH LR + A +A I+YGGSV N EL D+ Sbjct: 4 RPKLVVGNWKLHGSLNGNAELLEKIKAA---GQTRAALAVCAP----FPYLAQCQSVLAGSSVAWGAQDVSAETRGAFTGEVAASMLSEFGCGYAIVGHSERRTYHGETDAQVAIKALRALEHGITPIVCVGETLAQREAGETELVVARQLEAVLESLSVEQLGHIVVAYEPVWAIGTGKTATSEQAQAVHAFLRGRV-AACDAGVAQRMPILYGGSVKPDNAAELFTMADI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSS (Triosephosphate isomerase OS=Mycobacterium sp. (strain MCS) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L LG + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DV Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSK (Triosephosphate isomerase OS=Mycobacterium sp. (strain KMS) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L LG + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DV Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDV 233
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_MYCSJ (Triosephosphate isomerase OS=Mycobacterium sp. (strain JLS) GN=tpiA PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30 Identity = 86/233 (36.91%), Postives = 117/233 (50.21%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS--NIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L LG + ++GHSERR +E + V K A A G+ I C+GE L+ REAG+ ++ Q + ++S V+AYEPVWAIGTG+VA A AQEV +R L +SP++AA R++YGGSVN N E+ AQ DV Sbjct: 1 MARKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDLRSVQTLVDGDKLRLSYGAQDVSQHDSGAYTGEISGAFLAKLGCSFAVVGHSERRTYHHEDDALVAAKAAAAFRHGITPIVCIGEHLKVREAGNHVEHNVEQLRGSLAGLTSEQIGQAVIAYEPVWAIGTGRVAGAADAQEVCKAIRDELGKLSSPQLAAGIRVLYGGSVNAKNVGEIVAQEDV 233 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |