CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIME (Triosephosphate isomerase 1 OS=Rhizobium meliloti GN=tpiA1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.360e-30 Identity = 82/223 (36.77%), Postives = 113/223 (50.67%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLN--EGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 V GNWK NGT + +I ++ +G L++ P + AQ+C K+ GA TGE+SAEM+ + VI+GHSERR E + V K A L I CVGET E+R+AG T+D++ Q ++ N V+AYEPVWAIGTG T + +E H +R+ L + E RI+YGGSV +N KEL +V Sbjct: 9 VAGNWKMNGTRASLDQIKAMAEGVKGDLSARVDALICPPATLLYVATALCDDSP-LMIGAQDCHQKQSGAHTGEVSAEMVADCFGTHVIVGHSERRTDHGEGDALVRAKTEAAHGADLVAIVCVGETEEERKAGRTLDILKRQLSESLPDQATAENTVIAYEPVWAIGTGLTPTVSDVEEAHAFMRRELVSRFGAE-GGKMRILYGGSVKPSNAKELMGVANV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ENTFA (Triosephosphate isomerase OS=Enterococcus faecalis GN=tpiA PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29 Identity = 79/227 (34.80%), Postives = 114/227 (50.22%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E + + L + + +AAQNC+ + GAFTGE S + +LG+ +VI+GHSERR +E++E + K + G+ I C GETLE EAG T + + Q TK + + +++V+AYEP+WAIGTGK A A E+ +R + E++ A RI YGGSV N E A+ +V Sbjct: 2 RKPIIAGNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVKLAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANGMTPIFCCGETLETYEAGKTAEWIEGQITKGLVGLSNEQVASMVIAYEPIWAIGTGKSADANIADEICGVVRSTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENV 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_SYNJB (Triosephosphate isomerase OS=Synechococcus sp. GN=tpiA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29 Identity = 84/230 (36.52%), Postives = 112/230 (48.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVS----VLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R + GNWK + T E ++ + L F L +V R D V AQN + GAFTGEIS ML LG+ +VI+GHSERR E++E V ++A A GL I CVGE+ +QRE G T + Q + N+V+AYEP+WAIGTG+ +A V +R+ L P I+YGGSV N EL AQP++ Sbjct: 2 RPILIAGNWKMHKTQAEAREFLRELGLALRSSPSGSASQRQIILCVPFTDLAVVAEQSRGSDIAVGAQNLHWEDQGAFTGEISGPMLAELGVRYVIVGHSERRQYFGETDETVNRRLAAAQRHGLTPILCVGESQQQREQGLTESWIVGQLDRALQGI-DLENLVIAYEPIWAIGTGQTCAAQEANRVIGLIRQHLGNAQLP-------ILYGGSVKAGNIDELMAQPEI 223
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_DICT6 (Triosephosphate isomerase OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29 Identity = 83/231 (35.93%), Postives = 121/231 (52.38%), Query Frame = 3 Query: 42 RKFFVGGNWK----CNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ + NWK C T +K+ + L++G ++ L+K + + AQN + +K GA+TGEIS ML +L +VI+GHSERR +E+NE + K+ A + GL I CVGE E+RE G T +V+ Q + + + + IV+AYEPVWAIGTG A A EV +RK + E++ RI YGGSVN N E +Q ++ Sbjct: 2 RRKIIAANWKMYKTCAETESFIKEFIE-LSKGYEEKEIVICPPFTSLYVASKLLKDTA---IKLGAQNMFWEKEGAYTGEISPIMLKDLNCTYVIIGHSERRNYFSETNEMINKKIKSAFNYGLIPIFCVGEKWEERERGKTEEVITKQVREGLEGLEKENVEKIVIAYEPVWAIGTGHSAKGEDANEVAGLIRKIISEMYDTEVSQKIRIQYGGSVNPQNITEFLSQNEI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBL (Triosephosphate isomerase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29 Identity = 83/228 (36.40%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R + GNWK N T +E ++V L ++ L V ++ + V AQN ++ GA+TGEI+ +ML LG+ +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++ Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKP--LVKDAKCDVVVCPTYVCLPAVLEEVKGSNIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGENVADKVRIQYGGSVKPGTIKAQMAKEEI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBK (Triosephosphate isomerase OS=Clostridium botulinum (strain Okra / Type B1) GN=tpiA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.426e-29 Identity = 83/228 (36.40%), Postives = 115/228 (50.44%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R + GNWK N T +E ++V L ++ L V ++ + V AQN ++ GA+TGEI+ +ML LG+ +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++ Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKP--LVKDAKCDVVVCPTYVCLPAVLEEVKGSNIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGESVADKVRIQYGGSVKPGTIKAQMAKEEI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LEIXX (Triosephosphate isomerase OS=Leifsonia xyli subsp. xyli GN=tpiA PE=3 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.862e-29 Identity = 69/145 (47.59%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 252 GAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGAN 686 GA+TGEI+A L L +VI+GHSERR + NE++E V K A A+ G+ I CVGET E E V AQ +A + S ++ V+AYEPVWAIG+G+ ATP QA++V LR + E+AA TRI+YGGSV N Sbjct: 79 GAYTGEIAASFLAALEARYVIIGHSERRTLHNETDEQVAAKTAQAVKNGISPIVCVGETAEDLEKHGASAVPVAQLRAALAGIDSAADFVVAYEPVWAIGSGQAATPEQAEQVAAALRAVIAEALGDEVAAKTRILYGGSVKSGN 223
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ONYPE (Triosephosphate isomerase OS=Onion yellows phytoplasma GN=tpiA PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.432e-29 Identity = 81/223 (36.32%), Postives = 116/223 (52.02%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK +E + + ++ Q L + + V AQN + + GAFTGE+S + L++LG+ V+LGHSERR E+++ V K+ AL L CVGE+L +E T + Q I V + NI++AYEPVWAIGTGK ATP A +V ++R + A S + + A RIIYGGSV+ AN K + QP + Sbjct: 10 IAGNWKMYKCKDEALEFIQKVSL-QVPDQTQVQTLIFPQLTLLDSLAQLQGTNLQVGAQNMFYESEGAFTGEVSPQNLLSLGVKHVLLGHSERRTFFGETDQTVNLKLLSALKHKLVPTVCVGESLLTKENNQTQVFLDQQLTNIFAGVPEEALQNIIIAYEPVWAIGTGKSATPQDANKVIEQIRDKVTALYSSQASCAMRIIYGGSVSVANIKTILEQPAI 231
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_RALEJ (Triosephosphate isomerase OS=Ralstonia eutropha (strain JMP134) GN=tpiA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29 Identity = 91/229 (39.74%), Postives = 117/229 (51.09%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVA--AQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +G+ + L EG F +L ++ L VA AQ+ + GAFTGE++A ML G + ++GHSERR ES+ V K AL G+ + CVGETL QREAG T VV Q +A D +S +VLAYEPVWAIGTGK A+ QAQ VH LR + +A I+YGGSV N EL + D+ Sbjct: 2 RQKLVIGNWKMHGS----LAANAALLEGIKAAPARARLAVCAPFPYLAQCQALLNGS-QVAWGAQDVSAEARGAFTGEVAASMLGEFGCTYALVGHSERRTYHGESDAVVAAKALRALEFGIIPVICVGETLAQREAGETEVVVGRQLQAALDALSVEQLGRVVLAYEPVWAIGTGKTASSEQAQAVHAFLRAEV-RERDAGVADRMAILYGGSVKPDNAAELFSMSDI 224
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_LACBA (Triosephosphate isomerase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=tpiA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29 Identity = 78/224 (34.82%), Postives = 119/224 (53.12%), Query Frame = 3 Query: 54 VGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 + GNWK N + E ++ + + +GQ LFL ++ ++ VAA+ C+ + GA+TGE S L +GIP+ I+GHSERR NE+++ + KV G+ I C ET+ +R AG + V Q A VS+ + IV+AYEP WAIG+G A+ QA+E + +R+ L S ++A R++YGGSV N L A+ +V Sbjct: 6 IAGNWKMNKSVTEARQFIDAV-QGQLPQADVIETAVAAPALFLQTMLDANAEGTLRVAAETCYYEDEGAYTGETSPRALHEMGIPYTIVGHSERRRYFNETDDVINRKVQAVFRNGMTPILCCDETMGRRTAGEKIHWVVNQVSAALKGVSAEDAAKIVVAYEPSWAIGSGTSASSDQAEEGCYLIRQTLADIYSDDLANGVRVLYGGSVKPDNIAGLMAKSNV 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |