CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PORG3 (Triosephosphate isomerase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=tpiA PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.272e-42 Identity = 97/228 (42.54%), Postives = 134/228 (58.77%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK V GNWK N T +E + L+ F+ L + +++ VAA+NC K+ GA+TGE+SA M+ + G +VI+GHSERR +E++ + +KV ALS GL I CVGE LE+REAG +VVA Q + + + ++ ++LAYEPVWAIGTGK AT QAQE+H +RK + A E+A I+YGGS N AN KEL ++ DV Sbjct: 2 RKNIVAGNWKMNKTLQEGLALAKELDAALKGRTISCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGKTATADQAQEMHAHIRKSIAAKYGKEVANGCSILYGGSCNAANAKELFSRADV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLT3 (Triosephosphate isomerase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tpiA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.582e-42 Identity = 107/232 (46.12%), Postives = 135/232 (58.19%), Query Frame = 3 Query: 42 RKFFVGGNWKCN----GTPEEVKKIVSVL-NEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIAD-RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK FV GNWK N G +I+ +L +E +F + +S+++ +AAQNC+ + GA+TGEISA ML N G +VILGHSERR NE++E V KV ALS L VI CVGETLEQRE+G T VV Q + + D ++V+AYEPVWAIGTGK ATP QAQEVH +R + E+A RI YGGSV +N KEL PD+ Sbjct: 2 RKKFVAGNWKMNKDLLGAVSLATEILQLLGDEAPTCEVAIAPTFLCQQAVFQVIDESAIK----LAAQNCFYEDQGAYTGEISAAMLRNSGCEYVILGHSERRQYFNETDEIVNKKVKNALSVELDVIMCVGETLEQRESGVTKSVVETQVRGGLKDLTAEDMKSVVIAYEPVWAIGTGKTATPEQAQEVHAFIRGIVKDMFGEEVANELRIQYGGSVKTSNAKELFGMPDI 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 9.521e-42 Identity = 94/229 (41.05%), Postives = 138/229 (60.26%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R V GNWK NG K +++ + + F +L +S++ + +QN ++ GAFTGE+SA ML +G +VI+GHSERR + E++ + K A+A + GL I CVGETLE+R++G+T +V Q +A+ D V++++N ++AYEPVWAIGTGK A+P QAQ VH LR++L A P+IA + R++YGGSV N L AQ D+ Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGKTASPEQAQAVHACLRQFL-AKDDPDIAQSLRLLYGGSVKADNAALLFAQSDI 224
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLPD (Triosephosphate isomerase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=tpiA PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.243e-41 Identity = 104/229 (45.41%), Postives = 126/229 (55.02%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEE----VKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK V GNWK N T E ++ + L EG + L S L + AQNC + GAFTGE+SA M+ G VI GHSERR E+N V KV +ALS+GL+VI C GETLEQRE G T DVV AQ + + SNIV+AYEPVWAIGTGK AT QA+EVH +R + E A RI YGGSV +N KEL + P++ Sbjct: 2 RKKIVVGNWKMNKTVTESLVLAAEVTAALGEGFTGCDVGIAPPFTALYEVGKLTGSRLA----LVAQNCHFEPDGAFTGEVSASMVREAGCSAVIAGHSERRHCFGETNAIVNRKVKHALSEGLQVIMCAGETLEQREGGVTGDVVTAQVREGLLGIDDISNIVIAYEPVWAIGTGKTATSEQAEEVHLLIRNTVSDLFGEEAAGRLRIQYGGSVKPSNAKELFSMPNI 226
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PARD8 (Triosephosphate isomerase OS=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) GN=tpiA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41 Identity = 99/228 (43.42%), Postives = 131/228 (57.46%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPD-FHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK V GNWK N T E + L+E F L V +++ + VAA+NC K+ GA+TGE+SA M+ + G +VILGHSERR +E+ E + KV AL+ GL I C+GE LE+REAG +VV AQ +S+ + I+LAYEPVWAIGTGK A+ QA+E+H +R L A E+A I+YGGS N N KEL A+P+V Sbjct: 2 RKNIVAGNWKMNTTLAEGLALAKGLDEALKGKTPNCDVIIGTPFTHLASVAAAIDTNKIGVAAENCADKEKGAYTGEVSAAMVASTGAKYVILGHSERRAYYHETPEILKTKVELALANGLTPIFCIGEVLEEREAGKHFEVVDAQIAGSLFDLSAEDFGKIILAYEPVWAIGTGKTASAEQAEEIHAHIRATLAAKYGNEVADNCTILYGGSCNAGNAKELFAKPNV 229
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_METCA (Triosephosphate isomerase OS=Methylococcus capsulatus GN=tpiA PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 6.171e-41 Identity = 100/228 (43.86%), Postives = 129/228 (56.58%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK NG V ++++ + G F+++ L+ + AQN GAFTGEISA ML G I+GHSERRL+ ESNE V + A+ LK I CVGETLEQRE G T+ V+ AQ + + V S + V+AYEPVWA+GTG+ AT QAQEVH+ +R L A +PE+A A +IIYGGSV N EL A PD+ Sbjct: 2 RRPLVVGNWKMNGRSASVARLLNDILAG--IGDCKAEVGVCVPFVYIPQASEILKGTKVMLGAQNVADHNSGAFTGEISAGMLREFGCELAIVGHSERRLLYGESNELVASRYEQAIQGHLKPILCVGETLEQREQGRTLAVIGAQIDTVFEFAGVQSLEHAVIAYEPVWAVGTGRSATTGQAQEVHYHIRS-LIARWNPEVAQAVQIIYGGSVKPENSAELFAMPDI 226
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40 Identity = 97/229 (42.36%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L+ LF+ V L + V AQN V+ + GA TGE++ E LV G V++GHSERR ++ E++E + K A A ++GLK + C+GETLE+REAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELTEGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CLOTH (Triosephosphate isomerase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40 Identity = 98/229 (42.79%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M RK GNWK N TP+E + V L +G+ G+V+++ + VAAQN ++ GAFTGE+S ML LG+ +VI+GHSERR E++E V KV A GLK I CVGE+L QRE G T ++V Q K +S+ V+AYEP+WAIGTGK AT QA+EV +R+ + ++A A RI YGGSVN AN EL P++ Sbjct: 1 MSRKVIAAGNWKMNKTPKEAVEFVQAL-KGRVADADTEVVVGVPFVCLPGVVEAAKGSNIKVAAQNMHWEEKGAFTGEVSGPMLAELGVDYVIIGHSERRQYFGETDETVNKKVHAAFKYGLKPIICVGESLTQREQGVTAELVRYQVKIALLGLSAEQVKEAVIAYEPIWAIGTGKTATNEQAEEVCGIIRECIKELYGQDVAEAIRIQYGGSVNAANAAELFNMPNI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEF5 (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.063e-40 Identity = 100/229 (43.67%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVKK-GGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++++ L L++ V L+ V AQN V+ GA TGEI+ LV+ G V++GHSERRLI+ E + + K A A + GLK + CVGETLEQREAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R L A S E+A R++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELINGLRH--LALPSGVDVAVFPPCLYINQVIDGLKGKSIQVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRLIMGERDATLNRKFAAAQACGLKPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHAAIRAQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PELCD (Triosephosphate isomerase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.063e-40 Identity = 94/228 (41.23%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSL-RPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ F+ GNWK + T E +V L +G F L V ++L + D VAAQNC+ + GAFTGE+S +L + G +VI+GHSERR + ES+ F+ KV + GL I C+GETLE+REA T DV+ Q + + + ++ IV+AYEPVWAIGTGK AT +QAQ+ H +R + ++A RI+YGGSV N L QPD+ Sbjct: 2 RRPFIAGNWKLHKTSAEAAALVGEL-KGALSDVVDRDIVVAPVFTSLAAVIATLEKSDISVAAQNCYPENQGAFTGEVSPALLKDAGCRYVIVGHSERRQLFAESDAFINRKVKAVIDAGLSAILCIGETLEEREADKTFDVLERQVRCGLEGLDAAAMEQIVVAYEPVWAIGTGKTATDSQAQQAHSFIRSLVNDIFGSKVAQQVRIVYGGSVKPGNVDGLLQQPDI 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |