CN188175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40 Identity = 97/229 (42.36%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L+ LF+ V L + V AQN V+ + GA TGE++ E LV G V++GHSERR I+ E++E + K A A ++GLK + C+GETLE+REAG T++VV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40 Identity = 97/229 (42.36%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L+ LF+ V L + V AQN V+ + GA TGE++ E LV G V++GHSERR I+ E++E + K A A ++GLK + C+GETLE+REAG T++VV Q +I + V ++++ V+AYEPVWAIGTG ATP QAQ+VH +R L A + E+AA +++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELTKGLSN--LALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEVVGRQLSSIIEAFGVKAFADAVIAYEPVWAIGTGLTATPQQAQDVHAAIRGQLAAEDA-EVAAKVQLLYGGSVKAANAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACWK (Triosephosphate isomerase OS=Bacillus weihenstephanensis (strain KBAB4) GN=tpiA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 6.823e-40 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSWSNI-VLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV + D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A + V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLAEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAKAEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTLAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKVTVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_CHLCH (Triosephosphate isomerase OS=Chlorobium chlorochromatii (strain CaD3) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.911e-40 Identity = 99/226 (43.81%), Postives = 125/226 (55.31%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK V GNWK N +++ + L FL L K + AQNC + GA+TGE+SA ML G VI+GHSERR E+N V +V AL++GL VI CVGETL +RE+G T D+V+AQ + VS SN+V+AYEPVWAIGTGK AT AQA+EVH +R + A A RI YGGSV +N EL A P++ Sbjct: 2 RKKIVVGNWKMNNGVAASEQLAADLLAALGSSFTGCDVGIAPTFLSLTTAGKVIAGSTIQLVAQNCHYENDGAYTGEVSAAMLKGAGCSSVIIGHSERRQFFGETNATVNLRVKKALAEGLDVILCVGETLAERESGVTGDIVSAQVREGLVGVSDISNVVIAYEPVWAIGTGKTATSAQAEEVHLMIRTLVTELYGEPAAQALRIQYGGSVKPSNAVELFAMPNI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLGLVKSSLR-PDFHVAAQNCWVK-KGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 R+ V GNWK +GT V ++ L G LF+ V L+ V AQN V+ + GA TGE++ L +G +V++GHSERR ++ ES E + K A A GL + C+GETLE+REAG T++VV Q ++ D +++++N V+AYEPVWAIGTG A+P QAQ+VH +RK L A + E+A +++YGGSV AN EL PD+ Sbjct: 2 RRPMVAGNWKMHGTRASVAELTQGL--GNMLIPEGIEVAVFPPALFINEVIDGLKGKGITVGAQNSAVQPEQGALTGEVAPSQLAEVGCKFVLIGHSERRQVIGESEEVLNRKFAAAQKSGLTPVLCIGETLEEREAGKTLEVVGRQLSSVIDAFGIAAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQLAAKDA-EVAQNVQLLYGGSVKAANAAELFGMPDI 227
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_COLP3 (Triosephosphate isomerase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 95/232 (40.95%), Postives = 134/232 (57.76%), Query Frame = 3 Query: 36 MGRKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLF---LGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 M R+ V NWK NG V +VS L + + +L + ++L HV +QN + GA+TGE+S ML NL I +VI+GHSERR I E++ V KV AL+ GL I C+GE+ +R G T V++AQ + + D + + ++V+AYEPVWAIGTGK A+ A AQE H +RK+L A + ++A ++YGGSVN ANC+EL AQ D+ Sbjct: 1 MTRQAIVAANWKMNGDSALVDTMVSGLADIELSSHVDVVICPSFPYLSELNQKIKAANLNEAIHVGSQNVSEHESGAYTGEVSTAMLQNLAINYVIVGHSERRSIFKETSTQVAKKVHAALNAGLTPILCIGESEAERATGETETVLSAQIQPVIDEIGIEKFKDVVIAYEPVWAIGTGKTASSAMAQETHQFIRKFL-AQQNEQVADKVPLLYGGSVNAANCEELFAQTDI 231
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACHK (Triosephosphate isomerase OS=Bacillus thuringiensis subsp. konkukian GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACCZ (Triosephosphate isomerase OS=Bacillus cereus (strain ZK / E33L) GN=tpiA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACCR (Putative triosephosphate isomerase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tpiA PE=5 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228
BLAST of CN188175 vs. ExPASy Swiss-Prot
Match: TPIS_BACCE (Triosephosphate isomerase OS=Bacillus cereus GN=tpiA PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39 Identity = 103/228 (45.18%), Postives = 127/228 (55.70%), Query Frame = 3 Query: 42 RKFFVGGNWKCNGTPEEVKKIVSVLNEGQXXXXXXXXXXXXXXFLFLG-LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLGIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPAQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDV 716 RK + GNWK N T E V + +GQ LFL LV ++ D V AQN +K GAFTGEIS L +L + +V+LGHSERR + E++E V K A GL I C GETLE+RE+G T D+VA Q TKA+A V+AYEP+WAIGTGK ++ A A EV +RK + SPE A A RI YGGSV N KE AQ D+ Sbjct: 2 RKPIIAGNWKMNKTLSEAVSFVEEV-KGQIPAASAVDAVVCSPALFLERLVAATEGTDLQVGAQNMHFEKNGAFTGEISPVALSDLKVGYVVLGHSERREMFAETDESVNKKTIAAFEHGLTPIVCCGETLEERESGKTFDLVAGQVTKALAGLTEEQVKATVIAYEPIWAIGTGKSSSSADANEVCAHIRKVVAEAVSPEAAEAVRIQYGGSVKPENIKEYMAQSDI 228 The following BLAST results are available for this feature:
BLAST of CN188175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188175 ID=CN188175; Name=CN188175; organism=Citrus sinensis; type=EST; length=718bpback to top |