CK939401

Overview
NameCK939401
Unique NameCK939401
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length833
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.341e-32
Identity = 74/187 (39.57%), Postives = 107/187 (57.22%), Query Frame = 2
Query:  284 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGL----SYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            + ++   + ++Y   EE   R A + KN+ +I   N++      S+ + +N F D + EEF++   G         K   +      P + DWRE G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC+    N+GCNGGL   AF+Y+  NGGLD+EE+YPY   +  CK++
Sbjct:   29 WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYN 214          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 3.058e-32
Identity = 84/219 (38.36%), Postives = 118/219 (53.88%), Query Frame = 2
Query:  200 IRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYES--VEEMKLRFATFSKNLDLIRSTNRKGLS---YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN--HKLTADVLPETKDWRESG-IVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            IR  +  G+R  E +  +   +A + L  AR  R  G    +  + E + RF  F  NL  + + N +      +RLG+N+FAD +  EF+   LG          G        + LP++ DWR+ G +V+PVK+QG CGSCW FS   ++E       G+ +SLSEQ+LV+CA+   N GCNGG+   AF +I  NGGLDTEE YPYT  DG C  +
Sbjct:   40 IRYNAEHGVRGLERTEAEA--RAAYDLWLARHRRGGGGGSRNGFIGEHERRFRVFWDNLKFVDAHNARADERGGFRLGMNRFADLTNGEFRATYLGTTPAGRGRRVGEAYRHDGVEALPDSVDWRDKGAVVAPVKNQGQCGSCWAFSAVAAVEGINKIVTGELVSLSEQELVECARNGQNSGCNGGIMDDAFAFIARNGGLDTEEDYPYTAMDGKCNLA 256          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.994e-32
Identity = 77/185 (41.62%), Postives = 104/185 (56.22%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGN-HKLTADV------LPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            R +  +  S+ E   RF  F  NL  + +TN+    Y+L LNKFAD +  EF+    G+  N     +G  H+  A +      +P + DWR+ G V+ VKDQG CGSCW FST  ++E        K ++LSEQ+LVDC +   NQGCNGGL   AFE+IK  GG+ TE  YPY  ++G C  S
Sbjct:   44 RSHHTVSRSLGEKHKRFNVFKANLMHVHNTNKMDKPYKLKLNKFADMTNHEFRSTYAGSKVNHPRMFRGTPHENGAFMYEKVVSVPPSVDWRKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE-ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDAS 227          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.994e-32
Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 2
Query:  242 SVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRK----GLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNH--KLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCK 826
            +++ VI  A     +A F + + + Y+S+ E KLRF  F   L  I   N K      +Y L +NKF+D + EEF R  L   +      +G     LT    PE+ DWR  G+V PV++QG CGSCW  ST  ++E+      G  + LS QQLVDC+ ++ N GCNGG     FEY+K N GL+++  YPY+GK+  CK
Sbjct:    9 ALIVVINAASDQELWADFKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEF-RDMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCNGGFAVNGFEYVKDN-GLESDADYPYSGKEDKCK 207          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.994e-32
Identity = 60/94 (63.83%), Postives = 74/94 (78.72%), Query Frame = 2
Query:  533 PETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            P + DWRE G V+PVKDQG CGSCW FSTTG+LE  + +  GK +SLSEQ LVDC++   NQGCNGGL  QAF+Y++ NGG+D+EE+YPYT KD
Sbjct:    2 PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKD 95          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.216e-32
Identity = 77/180 (42.78%), Postives = 104/180 (57.78%), Query Frame = 2
Query:  287 ARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD 814
            A   R YG     + E + R A + KN  +I   N++       +R+ +N F D + EEF++   G         K  H+     +P++ DW + G V+PVK+QG CGSCW FS TG+LE    +  GK +SLSEQ LVDC++A  NQGCNGGL   AF+YIK NG LD+EE+YPY   D
Sbjct:   34 ATHRRLYG-----MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATD 208          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.812e-32
Identity = 78/194 (40.21%), Postives = 113/194 (58.25%), Query Frame = 2
Query:  284 FARFARRYGKIYES----VEEMKLRFATFSKNLDLI--RSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTA----DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVC 823
            + R++  +GK   +    + +   RF  F  NL  I   + N K  +Y+LGL  FA+ + +E++   LGA     +  +     N K +A    D +P T DWR+ G V+ +KDQG CGSCW FST  ++E       G+ +SLSEQ+LVDC +++ NQGCNGGL   AF++I  NGGL+TE+ YPY G +G C
Sbjct:    4 YLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSY-NQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKC 196          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 6.812e-32
Identity = 74/177 (41.81%), Postives = 106/177 (59.89%), Query Frame = 2
Query:  311 KIYESVEEMKLRFATFSKNLDLIRSTNR-KGLSYRLGLNKFADWSWEEFQ----RHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVC 823
            K Y  + E + RF  F  NL  +   N     ++ +GL +FAD + EEF+    R ++   ++   T +  +K   DVLP+  DWR +G V  VKDQG+CGSCW FS  G++E       G+ ISLSEQ+LVDC + F N GC+GG+ + AFE+I  NGG++T++ YPY   D G+C
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKTERYLYK-EGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLC 228          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CPR2_ARATH (Probable cysteine proteinase At3g43960 OS=Arabidopsis thaliana GN=At3g43960 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.897e-32
Identity = 79/179 (44.13%), Postives = 102/179 (56.98%), Query Frame = 2
Query:  308 GKIYESVEEMKLRFATFSKNLDLIRSTNRK-GLSYRLGLNKFADWSWEEFQRHRLGAA---QNCSATTKGNHKLTADVLPETKDWRESGIVSP-VKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD-GVCK 826
            GK Y  + E + RF  F  NL  I   N     SY  GLNKF+D + +EFQ   LG     ++ S   +       DVLP+  DWRE G V P VK QG CGSCW F+ TG++E       G+ +SLSEQ+L+DC +  +N GC GG    AFE+IK NGG+ ++E Y YTG+D   CK
Sbjct:   49 GKNYNGLGEKERRFKIFKDNLKRIEEHNSDPNRSYERGLNKFSDLTADEFQASYLGGKMEKKSLSDVAERYQYKEGDVLPDEVDWRERGAVVPRVKRQGECGSCWAFAATGAVEGINQITTGELVSLSEQELIDCDRGNDNFGCAGGGAVWAFEFIKENGGIVSDEVYGYTGEDTAACK 227          
BLAST of CK939401 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.162e-31
Identity = 75/185 (40.54%), Postives = 98/185 (52.97%), Query Frame = 2
Query:  299 RRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTA-------DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFNNQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGVCKFS 832
            R +  +  S+ E + RF  F  N   + + N+    Y+L LNKFAD +  EF+    G+        +G  +          D +P + DWR+ G V+ VKDQG CGSCW FST  ++E        K +SLSEQ+LVDC     NQGCNGGL   AFE+IK  GG+ TE  YPY   DG C  S
Sbjct:   42 RSHHTVSRSLHEKQKRFNVFKHNAMHVHNANKMDKPYKLKLNKFADMTNHEFRNTYSGSKVKHHRMFRGGPRGNGTFMYEKVDTVPASVDWRKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDC-DTDQNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYDGTCDVS 225          
The following BLAST results are available for this feature:
BLAST of CK939401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 159
Match NameE-valueIdentityDescription
CATL1_CERAE2.341e-3239.57Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CYSP1_ORYSJ3.058e-3238.36Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
CYSEP_PHAVU3.994e-3241.62Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATLL_PHACE3.994e-3239.30Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CATL1_CHICK3.994e-3263.83Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATL2_BOVIN5.216e-3242.78Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CYSP4_BRANA6.812e-3240.21Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CPR1_ARATH6.812e-3241.81Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CPR2_ARATH8.897e-3244.13Probable cysteine proteinase At3g43960 OS=Arabidop... [more]
CYSEP_RICCO1.162e-3140.54Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004751_B02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIIF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939401 ID=CK939401; Name=CK939401; organism=Citrus sinensis; type=EST; length=833bp
GGGGAATAATAACAATAATAATAGTGTTCATAGACTGCATTCATTTAATC
CGAAGCCCTTGAGTGCGGTGCACTCTCTCCAAACAAAACAGACACAATCA
TTAGGCATGGCTCGCCCTGAACATTTGGTCTCGTCCATCATCTTGTTGCT
TTGCTGCGCTGCCGCAGCATCAGCATCAAGCTTCGACGACTCCAATCCGA
TCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTCCTC
CAGGTGATCGGCCAAGCCCGCCACGCTCTCTCCTTTGCCCGTTTTGCTCG
CAGGTATGGAAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGTTCG
CGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACGAATCGTAAAGGC
CTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGATTGGAGCTGGGAAGA
GTTCCAAAGGCACAGGTTGGGAGCTGCACAAAACTGCTCTGCCACTACAA
AAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGACTGG
AGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGGATC
TTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACCAGG
CCTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTGTGCC
CAAGCTTTCAACAACCAGGGATGCAATGGTGGGTTGCCATCCCAAGCCTT
TGAATACATCAAGTACAATGGTGGCCTTGATACTGAGGAAGCATATCCCT
ACACCGGAAAAGATGGTGTCTGCAAATTCTCAT
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