CN188173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATKB_XANAC (Potassium-transporting ATPase B chain OS=Xanthomonas axonopodis pv. citri GN=kdpB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 58/232 (25.00%), Postives = 101/232 (43.53%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYT---VIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ G + + E+ +TGE+ PV + G VIGGT + + K T S L +++ LVE A K P + + L ++L+ T + + ++ ++D L I+++V P +G P + G S VL K G+A+E A V+ ++ DKTGT+T G + L + + + P K+IV+ A+ Sbjct: 145 ADGEIVRGVATINEAAVTGESAPVLREAGTDRSGVIGGTRVLSDEIVFKVTAEPGHSFLDRMIALVEGANRQKTPNE----------IALTLLLAAMTLTFLIVVASLPAIA-GFVGVTLDPLLL-----IALLVCLIPTTIGGLLPAIGIAGMNRALSANVLAKSGKAVEVAGDVDVLLLDKTGTITYGDRQATAFHPLAGVDRVQLRDAAMLASLADPTPEGKSIVKLAR 360
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATKB_PSEAE (Potassium-transporting ATPase B chain OS=Pseudomonas aeruginosa GN=kdpB PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.305e-11 Identity = 61/233 (26.18%), Postives = 102/233 (43.78%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGS---ESALAQIVRLVESAQMAKAPVQKFAD--RISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G + V E+ ITGE+ PV + G T N V R+G+ ES L +++ LVE A+ K P + D I + L+++++ + A F G L L F ++++V P +G + G V+ K G+A+E+A V+ ++ DKTGT+T G + + ++ E + + P K+IVEY + Sbjct: 153 DGEVIEGVAAVNEAAITGESAPVIRESGGDRSAVTGNTQVVSDWLLVRIGANPGESTLDRMIALVEGAKRQKTPNEVALDILLIGLTLIFLLVVVTLKPF-ALFAGGN-----------------LPLVFLVALLVTLIPTTIGGLLSAIGIAGMDRLVRLNVIAKSGRAVEAAGDVHVLLLDKTGTITFGNRRCSALYAAPGVSGKELAEGALLASLADDTPEGKSIVEYLR 367
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATKB_ANASL (Potassium-transporting ATPase B chain OS=Anabaena sp. (strain L31) GN=kdpB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.235e-11 Identity = 59/236 (25.00%), Postives = 103/236 (43.64%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGY----TVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGK---FHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 +DG V+ G + V ES ITGE+ PV K G +V GGT + L ++ T + + +++ LVE A+ K P + V L ++L+ + + F+ F Y ++ + + ++++V P +G + G A V+ G+A+E+ VN +V DKTGT+T+G + + + V V + P K+IV A+ Sbjct: 163 ADGEVIMGVASVDESAITGESAPVLKESGSDIASSVTGGTRIISDELIVRVTADPGKGFIDRMIALVEGAERTKTPNE----------VALTVLLAVLSLVFLFVVATLPVFAYYADT---------PINVPILVALLVALIPTTIGGLLSAIGIAGMDRVAQFNVIATSGRAVEACGDVNTLVLDKTGTITLGNRLAEEFIPINGHSIEQVASVAWVASVFDDTPEGKSIVRLAE 379 The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bpback to top |