CN188173

Overview
NameCN188173
Unique NameCN188173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAA8 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain NCTC 8325) GN=copA PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.654e-51
Identity = 108/228 (47.37%), Postives = 152/228 (66.67%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+ ++  T++ W                +  +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL------------VTPGTFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAA3 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain USA300) GN=copA PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.654e-51
Identity = 108/228 (47.37%), Postives = 152/228 (66.67%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+ ++  T++ W                +  +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL------------VTPGTFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_ENTHR (Probable copper-importing P-type ATPase A OS=Enterococcus hirae GN=copA PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 6.233e-51
Identity = 109/227 (48.02%), Postives = 151/227 (66.52%), Query Frame = 3
Query:    6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEY 686
            +DG ++ G S + ESM+TGE+ PV K++   V GGT+N NG++ I+ +++G ++ LAQI+++VE AQ +KAP+Q+ AD+IS  FVP+V+ L+  T L              W+      +QLAL   +SV+VIACPCALGLATPTA+MVGTGVGA  G+LIKGG+ALE A  +N I+ DKTGT+T G+P V    +    ++  FY +    E  SEHPL KAIV Y
Sbjct:  261 TDGRIIAGTSALDESMLTGESVPVEKKEKDMVFGGTINTNGLIQIQVSQIGKDTVLAQIIQMVEDAQGSKAPIQQIADKISGIFVPIVLFLALVTLLV-----------TGWLTKD---WQLALLHSVSVLVIACPCALGLATPTAIMVGTGVGAHNGILIKGGEALEGAAHLNSIILDKTGTITQGRPEVTDV-IGPKEIISLFYSL----EHASEHPLGKAIVAY 468          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAAB (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=copA PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.140e-51
Identity = 106/228 (46.49%), Postives = 151/228 (66.23%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+ ++  T++ W                +  +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV         +     +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL------------VTPGTFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYHGDDQTL-----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAAN (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain N315) GN=copA PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVI---ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+   +L F  W+     G               +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPG---------------TFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAAM (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=copA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVI---ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+   +L F  W+     G               +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPG---------------TFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAA9 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain JH9) GN=copA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVI---ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+   +L F  W+     G               +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPG---------------TFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAA2 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain JH1) GN=copA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVI---ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+   +L F  W+     G               +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPG---------------TFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAA1 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=copA PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.389e-50
Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVI---ILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+   +L F  W+     G               +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G+PVV       N  L    +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLIFIVWITLVTPG---------------TFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGRPVVTDYH-GDNQTL----QLLATAEKDSEHPLAEAIVNYAK 540          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_STAAR (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain MRSA252) GN=copA PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.093e-50
Identity = 106/228 (46.49%), Postives = 150/228 (65.79%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            DG ++ G + + ESM+TGE+ PV K    TVIG T+N+NG + + AT+VG ++ALA I+++VE AQ +KAP+Q+ AD IS YFVP+V+ ++  T++ W                +  +F+ AL   ISV+VIACPCALGLATPT++MVGTG  A  G+L KGG+ +E  H+++ IV DKTGT+T G PVV         +     +++A  E +SEHPLA+AIV YAK
Sbjct:  330 DGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALANIIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL------------VTPGTFEPALVASISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDTIVLDKTGTITNGCPVVTDYHGDDQTL-----QLLATAEKDSEHPLAEAIVNYAK 540          
The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
COPA_STAA83.654e-5147.37Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA33.654e-5147.37Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_ENTHR6.233e-5148.02Probable copper-importing P-type ATPase A OS=Enter... [more]
COPA_STAAB8.140e-5146.49Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAN1.389e-5047.62Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAM1.389e-5047.62Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA91.389e-5047.62Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA21.389e-5047.62Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAA11.389e-5047.62Copper-exporting P-type ATPase A OS=Staphylococcus... [more]
COPA_STAAR3.093e-5046.49Copper-exporting P-type ATPase A OS=Staphylococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bp
AGTCTTCAGATGGTTACGTTTTGTGGGGACAGAGCCATGTCTATGAGAGT
ATGATAACTGGAGAGGCAAGGCCAGTGGCTAAGAGGAAGGGTTATACAGT
AATTGGTGGCACTGTGAATGAGAATGGGGTGCTACATATTAAGGCAACAA
GGGTTGGATCAGAGAGTGCTCTTGCTCAAATTGTTCGACTTGTTGAATCA
GCTCAGATGGCTAAGGCTCCAGTTCAGAAGTTCGCTGATCGTATTTCAAA
ATACTTTGTGCCTCTGGTCATCATCCTGTCATTTTCGACATGGCTTGCTT
GGTTTTTAGCTGGAAAGTTCCATAGCTACCCGGAATCCTGGATACCATCT
TCGATGGATAGCTTTCAGCTTGCACTACAGTTTGGAATCTCTGTTATGGT
CATAGCGTGTCCATGTGCGCTAGGCCTAGCGACTCCAACTGCTGTAATGG
TTGGAACTGGAGTTGGGGCATCTCAAGGAGTACTGATTAAAGGGGGTCAG
GCCTTGGAAAGTGCACATAAGGTGAATTGCATTGTGTTTGACAAAACTGG
AACTCTGACAGTTGGAAAGCCAGTAGTTGTCAGCACAAAGCTTTTGAAAA
ATATGGTACTGAGAGACTTCTATGAAGTTGTTGCTGCAACTGAGGTTAAC
AGTGAGCACCCATTGGCGAAGGCTATTGTTGAATATGCCAAGAA
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