CN188173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_BACSU (Copper-exporting P-type ATPase A OS=Bacillus subtilis GN=copA PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 9.000e-50 Identity = 107/228 (46.93%), Postives = 146/228 (64.04%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G+S V ESMITGE+ PV K G +V G TVN NG L IKA VG ++AL+ I+++VE AQ +KAP+Q+ AD+IS FVP+V+ ++ T+L W+L W ++ F A+ I+V+VIACPCALGLATPT++M G+G A G+L KGG+ LE H+++ IV DKTGT+T GKP + +D + AA E SEHPL +AI+ K Sbjct: 334 DGEVVEGRSAVDESMITGESLPVDKNPGDSVTGSTVNANGFLKIKAVNVGKDTALSHIIKIVEEAQGSKAPIQRLADQISGIFVPIVLGIAVLTFLIWYL----------W--AAPGDFAEAISKFIAVLVIACPCALGLATPTSIMAGSGRAAEFGILFKGGEHLEKTHRLDTIVLDKTGTVTNGKPRLTDAIPFGRFEEKDLLQFAAAAETGSEHPLGEAIIAGVK 549
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATCS_SYNE7 (Cation-transporting ATPase pacS OS=Synechococcus elongatus (strain PCC 7942) GN=pacS PE=3 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.175e-49 Identity = 110/232 (47.41%), Postives = 153/232 (65.95%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVV----AATEVNSEHPLAKAIVEYAK 692 DG V+ G+S V ESM+TGE+ PV K+ G VIG T+N+ G L I+ATRVG E+ LAQIV+LV+ AQ +KAP+Q+ AD+++ +FVP VI ++ T++ WF +WI + LAL + V++IACPCALGLATPT++MVGTG GA G+LIK ++LE A + ++ DKTGTLT G+P V + + RD + + A+ E SEHPLA+AIV Y + Sbjct: 271 DGEVIDGRSTVDESMVTGESLPVQKQVGDEVIGATLNKTGSLTIRATRVGRETFLAQIVQLVQQAQASKAPIQRLADQVTGWFVPAVIAIAILTFVLWF----------NWI----GNVTLALITAVGVLIIACPCALGLATPTSIMVGTGKGAEYGILIKSAESLELAQTIQTVILDKTGTLTQGQPSVTDFLAIGD---RDQQQTLLGWAASLENYSEHPLAEAIVRYGE 485
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_ARCFU (Probable copper-exporting P-type ATPase A OS=Archaeoglobus fulgidus GN=copA PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.005e-49 Identity = 109/227 (48.02%), Postives = 143/227 (63.00%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689 DG V+ G+S+V ESMI+GE PV K KG V G T+N GVL I+ATRVG E+ LAQIV+LVE A +K P+Q+ AD++ YF+P V++++ S ++ W+ H+ A I+V+V+ACPCA GLATPTA+ VG G GA G+LIK ALE A KV ++FDKTGTLT GKP V L N R+ + A E SEHP+A+AIV+ A Sbjct: 260 DGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA--HA-----------PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL-NGDERELLRLAAIAERRSEHPIAEAIVKKA 472
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATCU_SINMW (Copper-transporting P-type ATPase OS=Sinorhizobium medicae (strain WSM419) GN=actP PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 4.467e-49 Identity = 106/228 (46.49%), Postives = 147/228 (64.47%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V G S+V ESMITGE PV K VIGGT+N+ G + KAT+VGS++ LAQI+RLVE+AQ +K P+Q DR++ +FVP+VI+ + T+ AW++ G PS SF AL ++V++IACPCA+GLATPT++MVGTG A G+L + G+AL+S + + DKTGTLT G+P + + + +VA+ E SEHP+A+AIV AK Sbjct: 350 DGTVTDGSSYVDESMITGEPVPVQKATDSAVIGGTINKTGSITFKATKVGSDTLLAQIIRLVEAAQGSKLPIQALVDRVTAWFVPVVILAALLTFAAWYVLG----------PSPALSF--ALVNAVAVLIIACPCAMGLATPTSIMVGTGRAAELGILFRKGEALQSLRDADVVAVDKTGTLTKGRPELTDLVAAEGFEPDEVLCLVASLETLSEHPIAEAIVSAAK 565
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATCS_SYNY3 (Cation-transporting ATPase pacS OS=Synechocystis sp. (strain PCC 6803) GN=pacS PE=1 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 5.834e-49 Identity = 106/231 (45.89%), Postives = 149/231 (64.50%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVV---AATEVNSEHPLAKAIVEYAK 692 DG V+ G S V ES++TGE+ PV K G VIG T+N++G L I+ +++G +S LAQI++LV+ AQ +KAP+Q F DRI+ +FVP VI+++ + + W+L + + LA+ + V++IACPCALGLATPT+VMVGTG GA GVLIK +LE A K+ IV DKTGTLT GKP V + L + +++ A+ E SEHPLA+A+V Y + Sbjct: 265 DGVVVAGNSTVDESLVTGESFPVDKTVGTEVIGATLNKSGSLDIQVSKLGQDSVLAQIIQLVQQAQASKAPIQHFVDRITHWFVPTVIVVAIAAFCIWWL--------------TTGNITLAVLTLVEVLIIACPCALGLATPTSVMVGTGKGAEYGVLIKEASSLEMAEKLTAIVLDKTGTLTQGKPSVTNFFTLSPTSTEESLQLIQWAASVEQYSEHPLAEAVVNYGQ 481
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATCU1_RHIME (Copper-transporting ATPase 1 OS=Rhizobium meliloti GN=actP1 PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49 Identity = 103/228 (45.18%), Postives = 147/228 (64.47%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG VL G S+V ESMITGE PV K G V+GGT+N+NG +AT+VG ++ LAQI+++VE+AQ +K P+Q D+++ +FVP VI+++ T+ AW++ G PS +F AL ++V++IACPCA+GLATPT++MVGTG A G+L + G+AL+S + + I DKTGTLT G+P + + VA+ E SEHP+A+AIV AK Sbjct: 349 DGTVLDGNSYVDESMITGEPVPVQKAAGAEVVGGTINKNGSFTFRATKVGGDTLLAQIIKMVETAQGSKLPIQALVDKVTAWFVPAVILVAVLTFAAWYVFG----------PSPALTF--ALVNAVAVLIIACPCAMGLATPTSIMVGTGRAAELGILFRKGEALQSLREADVIALDKTGTLTKGRPELTDIVPADGFEADEVLSFVASLEALSEHPIAEAIVSAAK 564
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATU2_YEAST (Copper-transporting ATPase OS=Saccharomyces cerevisiae GN=CCC2 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 4.939e-48 Identity = 104/235 (44.26%), Postives = 154/235 (65.53%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAW-FLAGKFHSYPESWIPSSM-DSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLK------NMVLRDFYEVVAATEVNSEHPLAKAIVEY 686 +DG + G+S + ES++TGE+ V K+ G+ VI G+VN G + + T VG E+ LA I+++++ AQ++KAP+Q +AD ++ FVP ++IL+ T+ W F+ + P ++ ++ D+F + LQ SV+++ACPCALGLATPTA+MVGTGVGA GVLIKGG+ LE + + VFDKTGTLT G VV K LK N+ + + ATE S+HP++KAI+ Y Sbjct: 447 ADGIITRGESEIDESLMTGESILVPKKTGFPVIAGSVNGPGHFYFRTTTVGEETKLANIIKVMKEAQLSKAPIQGYADYLASIFVPGILILAVLTFFIWCFILNISANPPVAFTANTKADNFFICLQTATSVVIVACPCALGLATPTAIMVGTGVGAQNGVLIKGGEVLEKFNSITTFVFDKTGTLTTGFMVV--KKFLKDSNWVGNVDEDEVLACIKATESISDHPVSKAIIRY 679
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATCU2_RHIME (Copper-transporting ATPase 2 OS=Rhizobium meliloti GN=actP2 PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 8.424e-48 Identity = 102/228 (44.74%), Postives = 145/228 (63.60%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G S+V E+MITGE PV K V+GGT+N+ G + KAT+VGS++ LAQI++LVE+AQ +K P+Q DR++ +FVP VI+ + T+ AW+ G PS SF AL ++V++IACPCA+GLATPT++MVGTG A G+L + G+AL+ + + DKTGTLT G+P + + + +VA+ E SEHP+A+AIV AK Sbjct: 350 DGTVIDGSSYVDEAMITGEPLPVQKTADSAVVGGTINKTGSITFKATKVGSDTLLAQIIKLVETAQGSKLPIQALVDRVTGWFVPAVILAAVLTFAAWYTFG----------PSPALSF--ALVNAVAVLIIACPCAMGLATPTSIMVGTGRAAELGILFRKGEALQRLRDADVVALDKTGTLTKGRPELTDLVAAEGFEADEVLFLVASLETLSEHPIAEAIVSAAK 565
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPV_MYCTU (Probable cation-transporting ATPase V OS=Mycobacterium tuberculosis GN=ctpV PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.100e-47 Identity = 110/231 (47.62%), Postives = 151/231 (65.37%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGK----PVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689 DG V G++ V ESM+TGE+ PV K G V G TVN +G+L ++AT VG+++ALAQIVRLVE AQ KAPVQ+ ADR+S FVP VI ++ +T+ W L + P + + ++ ++V++IACPCALGLATPTA+MVGTG GA G+L+KGG+ LE++ K++ +VFDKTGTLT + V+ + + VLR + AA E SEHP+ AIV A Sbjct: 297 DGEVTDGRAAVDESMLTGESVPVEKTAGDRVAGATVNLDGLLTVRATAVGADTALAQIVRLVEQAQGDKAPVQRLADRVSAVFVPAVIGVAVATFAGWTLIA---ANPVAGMTAA-----------VAVLIIACPCALGLATPTAIMVGTGRGAELGILVKGGEVLEASKKIDTVVFDKTGTLTRARMRVTDVIAGQRRQPDQVLR----LAAAVESGSEHPIGAAIVAAA 509
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: SILP_SALTY (Putative cation-transporting P-type ATPase OS=Salmonella typhimurium GN=silP PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.201e-47 Identity = 102/228 (44.74%), Postives = 145/228 (63.60%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G++ V ESM+TGE+ PV K +G VIGGT+N+ G L I+A +VG E+ L++IV++V AQ ++AP+Q+ AD +S +FVPLVI+++ ++ W + G PE + + + +SV++IACPCALGLATP ++MVG G GA GVLIK +ALE KV+ +V DKTGTLT G P V L V AA + S+HPL A+V+ A+ Sbjct: 346 DGIVVEGKTTVDESMVTGESMPVTKTEGEPVIGGTINQTGSLIIRAEKVGDETMLSRIVQMVADAQRSRAPIQRMADSVSGWFVPLVILIAVVAFMIWSVWG-----PEPRMAHGLIA-------AVSVLIIACPCALGLATPMSIMVGVGKGAQAGVLIKNAEALERLEKVDTLVVDKTGTLTEGSPTVTGIISLNPGGETSLLRVTAAVDKGSQHPLGMAVVKAAQ 561 The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bpback to top |