CN188173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPB_MYCTU (Cation-transporting P-type ATPase B OS=Mycobacterium tuberculosis GN=ctpB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 101/231 (43.72%), Postives = 139/231 (60.17%), Query Frame = 3 Query: 3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL--KNMVLRDFYEVV---AATEVNSEHPLAKAIV 680 ++DG V+ G + + S +TGEA+PV +V+GGTV +G L I+AT VG+++ A +VRLVE AQ KA Q+ AD I+ FVP+V +++ AW ++G A + V+VIACPCALGLATPTA+MV +G GA G+ IKG +ALE+ ++ +VFDKTGTLTVG+ + VST + RD EV+ AA E SEH +A AIV Sbjct: 281 AADGVVVDGSAAIDMSAMTGEAKPVRAYPAASVVGGTVVMDGRLVIEATAVGADTQFAAMVRLVEQAQTQKARAQRLADHIAGVFVPVVFVIAGLAGAAWLVSGA--------------GADRAFSVTLGVLVIACPCALGLATPTAMMVASGRGAQLGIFIKGYRALETIRSIDTVVFDKTGTLTVGQ-LAVSTVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIV 496
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPB_MYCBO (Cation-transporting P-type ATPase B OS=Mycobacterium bovis GN=ctpB PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 101/231 (43.72%), Postives = 139/231 (60.17%), Query Frame = 3 Query: 3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLL--KNMVLRDFYEVV---AATEVNSEHPLAKAIV 680 ++DG V+ G + + S +TGEA+PV +V+GGTV +G L I+AT VG+++ A +VRLVE AQ KA Q+ AD I+ FVP+V +++ AW ++G A + V+VIACPCALGLATPTA+MV +G GA G+ IKG +ALE+ ++ +VFDKTGTLTVG+ + VST + RD EV+ AA E SEH +A AIV Sbjct: 281 AADGVVVDGSAAIDMSAMTGEAKPVRAYPAASVVGGTVVMDGRLVIEATAVGADTQFAAMVRLVEQAQTQKARAQRLADHIAGVFVPVVFVIAGLAGAAWLVSGA--------------GADRAFSVTLGVLVIACPCALGLATPTAMMVASGRGAQLGIFIKGYRALETIRSIDTVVFDKTGTLTVGQ-LAVSTVTMAGSGTSERDREEVLGLAAAVESASEHAMAAAIV 496
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_HELFE (Copper-transporting ATPase OS=Helicobacter felis GN=copA PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 85/228 (37.28%), Postives = 136/228 (59.65%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG + G++ V ESM++GE+ PV K++G + GT+N ++AT ++S LA+I+ L+ AQ +KAP+ + AD+++ FVP+VI ++ +L W + G F AL+ I+++VI+CPCALGLATP A++V + G+ K +LE A VN ++FDKTGTLT+G P+V ++ + + + + A+ E SEH +AK IV +AK Sbjct: 259 DGVLFKGEAEVDESMLSGESLPVYKKEGMDLFAGTLNTTTTFQMRATHTKAQSTLAKILTLIAKAQGSKAPIARLADKVAGVFVPIVIGIASIAFLVWLVLG---------------DFTRALEVFIAILVISCPCALGLATPMALLVAQKEASLLGLFFKDAVSLEKAKNVNHVIFDKTGTLTLGTPLVQEVRVAEGVDRLELLTLCASLEAQSEHVIAKGIVAHAK 471
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPA_MYCTU (Cation-transporting P-type ATPase A OS=Mycobacterium tuberculosis GN=ctpA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39 Identity = 94/225 (41.78%), Postives = 131/225 (58.22%), Query Frame = 3 Query: 3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAI 677 ++DG + G + V S +TGEA+P R G VIGGT +G L ++A VG+++ A +VRLVE AQ KA Q+ ADRIS FVP V++++ T W +AG P+ A+ ++V+VIACPCALGLATPTA+MV +G GA G+ +KG ++LE+ V+ +VFDKTGTLT G+ V + + A E SEH +A AI Sbjct: 278 AADGLAVDGSAAVDMSAMTGEAKPTRVRPGGQVIGGTTVLDGRLIVEAAAVGADTQFAGMVRLVEQAQAQKADAQRLADRISSVFVPAVLVIAALTAAGWLIAG---GQPDR-----------AVSAALAVLVIACPCALGLATPTAMMVASGRGAQLGIFLKGYKSLEATRAVDTVVFDKTGTLTTGRLQVSAVTAAPGWEADQVLALAATVEAASEHSVALAI 488
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CADA_STAAR (Probable cadmium-transporting ATPase OS=Staphylococcus aureus (strain MRSA252) GN=cadA PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39 Identity = 87/229 (37.99%), Postives = 137/229 (59.83%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV-LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG ++ G S V ++ ITGE+ PVAK V GT+NE G+L +K T+ ++ +++I+ LVE AQ +AP Q F D+ +KY+ P++++ +A P + S D++ + G++V+V+ CPCAL ++TP +++ G A +GVLIKGG LE + I FDKTGTLT G PVV K+L + V ++ + ++ A E S+HPLA AI++ A+ Sbjct: 250 DGIIINGVSAVNQAAITGESVPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPIIMV----------IAALVAVVPPLFFGGSWDTW---VYQGLAVLVVGCPCALVISTPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLNDQVEEKELFSIITALEYRSQHPLASAIMKKAE 465
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CADA2_STAAU (Probable cadmium-transporting ATPase OS=Staphylococcus aureus GN=cadA PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 5.473e-39 Identity = 87/229 (37.99%), Postives = 136/229 (59.39%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMV-LRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG ++ G S V ++ ITGE+ PVAK V GT+NE G+L +K T+ ++ +++I+ LVE AQ +AP Q F D+ +KY+ P++++ +A P + S D++ + G++V+V+ CPCAL + TP +++ G A +GVLIKGG LE + I FDKTGTLT G PVV K+L + V ++ + ++ A E S+HPLA AI++ A+ Sbjct: 328 DGIIINGVSAVNQAAITGESVPVAKTVDDEVFAGTLNEEGLLEVKITKYVEDTTISKIIHLVEEAQGERAPAQAFVDKFAKYYTPIIMV----------IAALVAVVPPLFFGGSWDTW---VYQGLAVLVVGCPCALVITTPISIVSAIGNAAKKGVLIKGGVYLEELGAIKAIAFDKTGTLTKGVPVVTDFKVLNDQVEEKELFSIITALEYRSQHPLASAIMKKAE 543
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_ECOLI (Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12) GN=copA PE=1 SV=4) HSP 1 Score: 160.229 bits (404), Expect = 9.335e-39 Identity = 87/227 (38.33%), Postives = 138/227 (60.79%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689 DG + G++ + E+M+TGE P K +G +V GTV ++G + +A+ VGS + L++I+R+V AQ +K + + AD+IS FVP+V++++ + W+ G P+ + L + +V++IACPCALGLATP +++ G G A GVL++ AL+ A ++ +VFDKTGTLT GKP VV+ K ++ + AA E S HPLA+AI++ A Sbjct: 358 DGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG----------PAPQIVYTLVI--ATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLARAILDKA 572
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_ECO57 (Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7 GN=copA PE=3 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.219e-38 Identity = 87/227 (38.33%), Postives = 137/227 (60.35%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689 DG + G++ + E+M+TGE P K +G +V GTV ++G + +A+ VGS + L++I+R+V AQ +K + + AD+IS FVP+V++++ + W+ G P+ + L + +V++IACPCALGLATP +++ G G A GVL++ AL+ A ++ +VFDKTGTLT GKP VV+ K + + AA E S HPLA+AI++ A Sbjct: 358 DGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFFG----------PAPQIVYTLVI--ATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADFDEAQALRLAAALEQGSSHPLARAILDKA 572
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPA_SALTI (Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38 Identity = 88/227 (38.77%), Postives = 135/227 (59.47%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689 DG + G++ + E+M+TGE P K +G +V GTV ++G + +A+ VGS + L++I+R+V AQ +K + + AD+IS FVP+V+ ++ + W+ G P+ + L + +V++IACPCALGLATP +++ G G A GVL++ AL+ A ++ +VFDKTGTLT GKP VV+ K + + AA E S HPLA AI+E A Sbjct: 357 DGEITQGEAWLDEAMLTGEPIPQQKGEGDSVHAGTVVQDGSILFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVAIALFSAAIWYFFG----------PAPQIVYTLVI--ATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSSHPLAHAILEKA 571
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATSY_SYNP6 (Probable copper-transporting ATPase synA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA PE=3 SV=2) HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38 Identity = 98/241 (40.66%), Postives = 134/241 (55.60%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKF------------------HSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAI 677 DG ++ GQS + +M+TGE P + G V GT+N + L I+A + GS++ LA IVR V AQ KAPVQ+FAD I+ FV V ++ T+ W G H E P S LAL ISV+V+ACPCALGLATPTA++V TG+ A QG+L++GG LE ++ VFDKTGTLT G+ ++ + L ++ + AA E +S HPLA A+ Sbjct: 281 DGCIVAGQSTLDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVAEAQQRKAPVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPHHGMEMAHPHSHSPLLLALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDVLEQLARIKHFVFDKTGTLTQGQFELIEIQPLADVDPDRLLQWAAALEADSRHPLATAL 521 The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bpback to top |