CN188173
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: AHM3_ARATH (Putative cadmium/zinc-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.068e-34 Identity = 85/229 (37.12%), Postives = 130/229 (56.77%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVS-TKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G V E +TGEA PV K K TV GT+N NG + + T + + +A++ +LVE AQ +K Q+F D+ SKY+ P +I++S ++A A K H+ + W+ + V+V ACPC L L+TP A A+ G+LIKG LE+ K+ + FDKTGT+T G+ +V+ L +++ L+ V++TE S HP+A A+V+YA+ Sbjct: 227 DGVVVDGNCEVDEKTLTGEAFPVPKLKDSTVWAGTINLNGYITVNTTALAEDCVVAKMAKLVEEAQNSKTETQRFIDKCSKYYTPAIILISI-CFVAIPFALKVHNL-KHWV-----------HLALVVLVSACPCGLILSTPVATFCALTKAATSGLLIKGADYLETLAKIKIVAFDKTGTITRGEFIVMDFQSLSEDISLQSLLYWVSSTESKSSHPMAAAVVDYAR 442
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPC_MYCLE (Probable cation-transporting P-type ATPase C OS=Mycobacterium leprae GN=ctpC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.822e-34 Identity = 86/225 (38.22%), Postives = 129/225 (57.33%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVS-TKLLKNMVLRDFYEVVAATEVNSEHPLAKAIV 680 DG V+ G++ V +S ITGE PV+ G V G+V G L ++A+ VG + + +IV VE AQ +AP+Q + S+ FVP ++S T + ++ ++V++IACPCA+GLATPTA+ G GA +G+LIKGG LE A +V+ I+FDKTGTLTVG+PVV + + K+ A++E++S HPLA+A++ Sbjct: 261 DGEVIDGEAVVNQSAITGENLPVSVMAGSHVHAGSVVVRGRLMVRASAVGKHTTIGRIVTRVEEAQHDRAPIQTVGENFSRCFVPTSFVVSAITL----------------------AITKDVRRTMTVLLIACPCAVGLATPTAISAAIGNGARRGILIKGGSHLEQAGRVDAILFDKTGTLTVGRPVVTNIVAMHKDWSPEQVLAYAASSEIHSRHPLAEAVI 463
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPC_MYCTU (Probable cation-transporting P-type ATPase C OS=Mycobacterium tuberculosis GN=ctpC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34 Identity = 85/225 (37.78%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVS-TKLLKNMVLRDFYEVVAATEVNSEHPLAKAIV 680 DG V+ G++ V +S ITGE PV+ G V G+V G + ++A VG+++ + +I+ VE AQ+ +AP+Q + S+ FVP I+S +A + G ++ +++++IACPCA+GL+TPTA+ G GA +G+LIKGG LE A +V+ IVFDKTGTLTVG+PVV + + K+ A++E++S HPLA+A++ Sbjct: 253 DGEVVDGEAIVNQSAITGENLPVSVVVGTRVHAGSVVVRGRVVVRAHAVGNQTTIGRIISRVEEAQLDRAPIQTVGENFSRRFVPTSFIVSA---IALLITGD-------------------VRRAMTMLLIACPCAVGLSTPTAISAAIGNGARRGILIKGGSHLEQAGRVDAIVFDKTGTLTVGRPVVTNIVAMHKDWEPEQVLAYAASSEIHSRHPLAEAVI 455
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPC_MYCBO (Probable cation-transporting P-type ATPase C OS=Mycobacterium bovis GN=ctpC PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34 Identity = 85/225 (37.78%), Postives = 133/225 (59.11%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVS-TKLLKNMVLRDFYEVVAATEVNSEHPLAKAIV 680 DG V+ G++ V +S ITGE PV+ G V G+V G + ++A VG+++ + +I+ VE AQ+ +AP+Q + S+ FVP I+S +A + G ++ +++++IACPCA+GL+TPTA+ G GA +G+LIKGG LE A +V+ IVFDKTGTLTVG+PVV + + K+ A++E++S HPLA+A++ Sbjct: 253 DGEVVDGEAIVNQSAITGENLPVSVVVGTRVHAGSVVVRGRVVVRAHAVGNQTTIGRIISRVEEAQLDRAPIQTVGENFSRRFVPTSFIVSA---IALLITGD-------------------VRRAMTMLLIACPCAVGLSTPTAISAAIGNGARRGILIKGGSHLEQAGRVDAIVFDKTGTLTVGRPVVTNIVAMHKDWEPEQVLAYAASSEIHSRHPLAEAVI 455
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAES (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copB PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33 Identity = 80/230 (34.78%), Postives = 133/230 (57.83%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ GQ+ + ES++TGE++ V K + VIGG++N +G + +K T VG + L+Q++ LV AQ K+ + +D+++ Y +I+ +++ W L I + +D AL+ ++V+VIACP ALGLA P T +GA G++IK +++E A ++ ++ DKTGTLT G V + KN + D + A+ E S HPLA +IV++AK Sbjct: 203 TDGIIVQGQTSIDESLVTGESKKVQKNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVIVGVISFIVWML-----------IQNDVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFASLESQSNHPLAISIVDFAK 418
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAHJ (Probable copper-transporting P-type ATPase B OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copB PE=3 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.631e-33 Identity = 80/230 (34.78%), Postives = 132/230 (57.39%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ GQ+ V ES++TGE++ V K + VIGG++N +G + +K T VG + L+Q++ LV AQ K+ + +D+++ Y +I+ +++ W L I + +D AL+ ++V+VIACP ALGLA P T +GA G++IK +++E A ++ ++ DKTGTLT G V + KN + D + A+ E S HPLA +IV++ K Sbjct: 203 TDGIIVQGQTSVDESLVTGESKKVQKNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVIVGVISFIVWML-----------IQNDVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFASLESQSNHPLAISIVDFTK 418
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAEQ (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copB PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 79/230 (34.35%), Postives = 132/230 (57.39%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ GQ+ + ES++TGE++ V K + VIGG++N +G + +K T VG + L+Q++ LV AQ K+ + +D+++ Y + + +++ W L I + +D AL+ ++V+VIACP ALGLA P T +GA G++IK +++E A ++ ++ DKTGTLT G V + KN + D + A+ E S HPLA +IV++AK Sbjct: 203 TDGIIVQGQTSIDESLVTGESKKVQKNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVSVGVISFIVWML-----------IQNDVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFASLESQSNHPLAISIVDFAK 418
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAAT (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 79/230 (34.35%), Postives = 132/230 (57.39%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ GQ+ + ES++TGE++ V K + VIGG++N +G + +K T VG + L+Q++ LV AQ K+ + +D+++ Y + + +++ W L I + +D AL+ ++V+VIACP ALGLA P T +GA G++IK +++E A ++ ++ DKTGTLT G V + KN + D + A+ E S HPLA +IV++AK Sbjct: 203 TDGIIVQGQTSIDESLVTGESKKVQKNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVSVGVISFIVWML-----------IQNDVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFASLESQSNHPLAISIVDFAK 418
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAA3 (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300) GN=copB PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.861e-33 Identity = 79/230 (34.35%), Postives = 132/230 (57.39%), Query Frame = 3 Query: 6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRD-FYEVVAATEVNSEHPLAKAIVEYAK 692 +DG ++ GQ+ + ES++TGE++ V K + VIGG++N +G + +K T VG + L+Q++ LV AQ K+ + +D+++ Y + + +++ W L I + +D AL+ ++V+VIACP ALGLA P T +GA G++IK +++E A ++ ++ DKTGTLT G V + KN + D + A+ E S HPLA +IV++AK Sbjct: 203 TDGIIVQGQTSIDESLVTGESKKVQKNQNDNVIGGSINGSGTIQVKVTAVGEDGYLSQVMGLVNQAQNDKSSAELLSDKVAGYLFYFAVSVGVISFIVWML-----------IQNDVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYVMMDKTGTLTEGNFSVNHYESFKNDLSNDTILSLFASLESQSNHPLAISIVDFAK 418
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: AHM2_ARATH (Putative cadmium/zinc-transporting ATPase 2 OS=Arabidopsis thaliana GN=HMA4 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32 Identity = 84/229 (36.68%), Postives = 128/229 (55.90%), Query Frame = 3 Query: 9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTK-LLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692 DG V+ G V E +TGEA PV K++ TV GT+N NG + +K T + + +A++ +LVE AQ +K Q+ D+ S+Y+ P +I++S + + K H+ + W F LAL V+V CPC L L+TP A A+ G+LIK L++ K+ + FDKTGT+T G+ +V+ K L +++ LR V++ E S HP+A IV+YAK Sbjct: 237 DGIVVDGNCEVDEKTLTGEAFPVPKQRDSTVWAGTINLNGYICVKTTSLAGDCVVAKMAKLVEEAQSSKTKSQRLIDKCSQYYTPAIILVSACVAIVPVIM-KVHNL-KHW-------FHLAL----VVLVSGCPCGLILSTPVATFCALTKAATSGLLIKSADYLDTLSKIKIVAFDKTGTITRGEFIVIDFKSLSRDINLRSLLYWVSSVESKSSHPMAATIVDYAK 452 The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bpback to top |