CN188173

Overview
NameCN188173
Unique NameCN188173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ZOSA_BACSU (Zinc-transporting ATPase OS=Bacillus subtilis GN=zosA PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.885e-31
Identity = 85/230 (36.96%), Postives = 123/230 (53.48%), Query Frame = 3
Query:    3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            ++DG +  G + + ES +TGE+ PV K  G TV  GTVN NG L ++ T+   +S   +I++LVESAQ + +P Q F +R    +V  V+I      +A  L     +   SW     ++F  A+ F    MV+A PCAL  +   A +     GA  G+L+KG   LE    V  I FDKTGT+T G+P V + ++ +     +  E V A E  S HPLA+AI  YA+
Sbjct:  171 AADGIIESGSTSLDESALTGESMPVEKNTGDTVFTGTVNRNGSLTVRVTKANEDSLFRKIIKLVESAQNSVSPAQAFIERFENAYVKGVLIA-----VALLLFVPHFALGWSW----SETFYRAMVF----MVVASPCALVASIMPAALSLISNGARNGMLVKGSVFLEQLGSVQMIAFDKTGTVTKGQPAVETIRIAEGFSEAEVLEAVYAIETQSSHPLAQAITAYAE 387          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: FIXI_RHIME (Nitrogen fixation protein fixI OS=Rhizobium meliloti GN=fixI PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 78/223 (34.98%), Postives = 123/223 (55.16%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAI 677
            DG VL G S +  S++ GE+ P     G TV  GT+N  G L ++AT    +S +A+I+ L+E+A+  +A  ++ ADR ++Y+ P V +L+  T++ W L                   + A+   ++V++I CPCALGLA P   +V  G     GV++K G A+E   +++ ++ DKTGTLT+GKP +V+   +    L       AA  V+S HP+A AI
Sbjct:  291 DGRVLSGTSDLDRSVVNGESSPTVVTTGDTVQAGTLNLTGPLTLEATAAARDSFIAEIIGLMEAAEGGRARYRRIADRAARYYSPAVHLLALLTFVGWMLV--------------EGDVRHAMLVAVAVLIITCPCALGLAVPVVQVVAAGRLFQGGVMVKDGSAMERLAEIDTVLLDKTGTLTIGKPRLVNAHEISPGRL----ATAAAIAVHSRHPIAVAI 495          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: FIXI_BRAJA (Nitrogen fixation protein fixI OS=Bradyrhizobium japonicum GN=fixI PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.200e-31
Identity = 75/227 (33.04%), Postives = 124/227 (54.63%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYA 689
            DG V+ G+S + +S+ITGE   V   +G  V  G++N +G L ++ +     + LA+I RL+++A  A++   + ADR S+ + P+V   +  T L W +AG               S+  A+  G++V++I CPCALGLA PT   V +G     GVL+  G A+E   + + ++FDKTGTLT+    V++       +  D +E+     ++S HP+A A+ + A
Sbjct:  275 DGTVIEGRSEIDQSLITGETLYVTAEQGTPVYAGSMNISGTLRVRVSAASEATLLAEIARLLDNALQARSRYMRLADRASRLYAPVVHATALITILGWVIAGA--------------SWHDAIVTGVAVLIITCPCALGLAIPTVQTVASGAMFKSGVLLNSGDAIERLAEADHVIFDKTGTLTLPDLEVMNAA----DIPADIFELAGRLALSSHHPVAAAVAQAA 483          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAAU (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus GN=copB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31
Identity = 76/230 (33.04%), Postives = 127/230 (55.22%), Query Frame = 3
Query:    6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGK-PVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            +DG ++ G++ + ES++TGE++ V K     VIGG++N +G + +K T  G    L+Q++ LV  AQ  K+  +  +D+++ Y     + +   +++ W L           I +++D    AL+  ++V+VIACP ALGLA P      T +GA  G++IK  +++E A  ++ I+ DKTGTLT G   V         +   +   + A+ E NS HPLA  IV++AK
Sbjct:  201 TDGIIVRGETSIDESLVTGESKKVHKTHNDDVIGGSINGSGTVQVKVTATGENGYLSQVMGLVNQAQNDKSKAELLSDKVAGYLFYFAVSIGLISFIVWML-----------IQNNVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYIMMDKTGTLTEGNFSVNHYESFTDELNNEEILSLFASLESNSNHPLATGIVDFAK 416          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_STAAR (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain MRSA252) GN=copB PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31
Identity = 76/230 (33.04%), Postives = 127/230 (55.22%), Query Frame = 3
Query:    6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGK-PVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVEYAK 692
            +DG ++ G++ + ES++TGE++ V K     VIGG++N +G + +K T  G    L+Q++ LV  AQ  K+  +  +D+++ Y     + +   +++ W L           I +++D    AL+  ++V+VIACP ALGLA P      T +GA  G++IK  +++E A  ++ I+ DKTGTLT G   V         +   +   + A+ E NS HPLA  IV++AK
Sbjct:  210 TDGIIVRGETSIDESLVTGESKKVHKTHNDDVIGGSINGSGTVQVKVTATGENGYLSQVMGLVNQAQNDKSKAELLSDKVAGYLFYFAVSIGLISFIVWML-----------IQNNVD---FALERLVTVLVIACPHALGLAIPLVTARSTSIGAHNGLIIKNRESVEIAQHIDYIMMDKTGTLTEGNFSVNHYESFTDELNNEEILSLFASLESNSNHPLATGIVDFAK 425          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: COPB_ENTHR (Copper-exporting P-type ATPase B OS=Enterococcus hirae GN=copB PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31
Identity = 78/231 (33.77%), Postives = 130/231 (56.28%), Query Frame = 3
Query:    6 SDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAW-FLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVL-RDFYEVVAATEVNSEHPLAKAIVEYAK 692
            +DG +  G + V ES +TGE++ V K+ G +VIGG++N +G + I  T  G    LA+++ +V  AQ  K+ ++  +D+++K+   + +++    ++AW FLA    + P+            AL+  ++V +IACP ALGLA P  V   T + A  G+L+K   A+E A+ ++ I+ DKTGTLT GK  V   ++L       +  + + A E ++ HPLA  I+ Y K
Sbjct:  277 TDGTIDKGHTIVDESAVTGESKGVKKQVGDSVIGGSINGDGTIEITVTGTGENGYLAKVMEMVRKAQGEKSKLEFLSDKVAKWLFYVALVVGIIAFIAWLFLA----NLPD------------ALERMVTVFIIACPHALGLAIPLVVARSTSIAAKNGLLLKNRNAMEQANDLDVIMLDKTGTLTQGKFTVTGIEILDEAYQEEEILKYIGALEAHANHPLAIGIMNYLK 491          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: ATZN_SYNY3 (Zinc-transporting ATPase OS=Synechocystis sp. (strain PCC 6803) GN=ziaA PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.722e-30
Identity = 78/225 (34.67%), Postives = 122/225 (54.22%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIVE 683
            DG +L G S V  S +TGE+ P   + G T++ G +N++GVL I+ T++ SES++A+++ LVE+A   KA  +KF  + ++Y+ P+++ LS +  L           P  +IP + D      +  + ++VI+CPC L ++ P     G G  A  G+LIKG   L+S   V  +VFDKTGTLT G   V            +   + A  E +S HP+A +I E
Sbjct:  260 DGEILGGTSQVDTSALTGESVPGTVKPGDTILAGMINQSGVLTIRVTKLFSESSIAKVLDLVENASSKKASTEKFITQFARYYTPVIVFLSLAVAL----------LPPLFIPGA-DRADWVYR-ALVLLVISCPCGLVISIPLGYFGGIGGAAKHGILIKGSTFLDSLTAVKTVVFDKTGTLTKGTFKVTQVVTKNGFSESELLTLAAKAESHSTHPIALSIRE 472          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPG_MYCTU (Probable cation-transporting ATPase G OS=Mycobacterium tuberculosis GN=ctpG PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 80/226 (35.40%), Postives = 118/226 (52.21%), Query Frame = 3
Query:    3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIV 680
            ++DG +  G++ +  S ITGE+ PV    G  V  G++N  GVL +  T   + ++LA+IV +VE+ Q+ K   Q+ AD I++  VP ++I +    +A    G     P  WI  ++            V+V A PCAL +A P  V+   G  +  GVLIKGG ALE+   +  +  DKTGTLT  +PVV+           +   V AA E  SEHPLA A++
Sbjct:  298 ATDGIIRAGRTALDVSAITGESVPVEVGPGDEVFAGSINGLGVLQVGVTATAANNSLARIVHIVEAEQVRKGASQRLADCIARPLVPSIMIAA--ALIAG--TGSVLGNPLVWIERAL-----------VVLVAAAPCALAIAVPVTVVASIGAASRLGVLIKGGAALETLGTIRAVALDKTGTLTANRPVVIDVATTNGATREEVLAVAAALEARSEHPLAVAVL 508          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: CTPG_MYCBO (Probable cation-transporting ATPase G OS=Mycobacterium bovis GN=ctpG PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.644e-30
Identity = 80/226 (35.40%), Postives = 118/226 (52.21%), Query Frame = 3
Query:    3 SSDGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWFLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVAATEVNSEHPLAKAIV 680
            ++DG +  G++ +  S ITGE+ PV    G  V  G++N  GVL +  T   + ++LA+IV +VE+ Q+ K   Q+ AD I++  VP ++I +    +A    G     P  WI  ++            V+V A PCAL +A P  V+   G  +  GVLIKGG ALE+   +  +  DKTGTLT  +PVV+           +   V AA E  SEHPLA A++
Sbjct:  298 ATDGIIRAGRTALDVSAITGESVPVEVGPGDEVFAGSINGLGVLQVGVTATAANNSLARIVHIVEAEQVRKGASQRLADCIARPLVPSIMIAA--ALIAG--TGSVLGNPLVWIERAL-----------VVLVAAAPCALAIAVPVTVVASIGAASRLGVLIKGGAALETLGTIRAVALDKTGTLTANRPVVIDVATTNGATREEVLAVAAALEARSEHPLAVAVL 508          
BLAST of CN188173 vs. ExPASy Swiss-Prot
Match: FIXI_RHILV (Nitrogen fixation protein fixI OS=Rhizobium leguminosarum bv. viciae GN=fixI PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.921e-30
Identity = 76/226 (33.63%), Postives = 129/226 (57.08%), Query Frame = 3
Query:    9 DGYVLWGQSHVYESMITGEARPVAKRKGYTVIGGTVNENGVLHIKATRVGSESALAQIVRLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAW-FLAGKFHSYPESWIPSSMDSFQLALQFGISVMVIACPCALGLATPTAVMVGTGVGASQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVSTKLLKNMVLRDFYEVVA-ATEVNSEHPLAKAIV 680
            DG V+ G+S +  S++TGE+ PV       V  G +N  G L ++ATR+   S L++I+ L+E+A+  +A  ++ ADR +  + P+V +L+  ++LAW FL G                ++ A+   ++V++I CPCALGLA P   +V  G    +G+++K G ALE   + + + FDKTGTLT+G     S++L++   + +    +A     +S HPL++A+V
Sbjct:  290 DGIVVSGESDLDLSIVTGESSPVTVASDSEVSSGAMNLTGSLVLRATRIAKNSLLSEIIGLMEAAEGGRARYRRIADRAATLYSPVVHLLALVSFLAWGFLGG---------------DWKQAMLVAVAVLIITCPCALGLAVPVVQVVAAGELFRKGIMVKDGSALERLAETDTVAFDKTGTLTMG-----SSRLVRVDAMDESAAAIARGLAAHSRHPLSRALV 495          
The following BLAST results are available for this feature:
BLAST of CN188173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ZOSA_BACSU1.885e-3136.96Zinc-transporting ATPase OS=Bacillus subtilis GN=z... [more]
FIXI_RHIME2.462e-3134.98Nitrogen fixation protein fixI OS=Rhizobium melilo... [more]
FIXI_BRAJA4.200e-3133.04Nitrogen fixation protein fixI OS=Bradyrhizobium j... [more]
COPB_STAAU9.357e-3133.04Probable copper-transporting P-type ATPase B OS=St... [more]
COPB_STAAR9.357e-3133.04Probable copper-transporting P-type ATPase B OS=St... [more]
COPB_ENTHR9.357e-3133.77Copper-exporting P-type ATPase B OS=Enterococcus h... [more]
ATZN_SYNY32.722e-3034.67Zinc-transporting ATPase OS=Synechocystis sp. (str... [more]
CTPG_MYCTU4.644e-3035.40Probable cation-transporting ATPase G OS=Mycobacte... [more]
CTPG_MYCBO4.644e-3035.40Probable cation-transporting ATPase G OS=Mycobacte... [more]
FIXI_RHILV7.921e-3033.63Nitrogen fixation protein fixI OS=Rhizobium legumi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188173 ID=CN188173; Name=CN188173; organism=Citrus sinensis; type=EST; length=694bp
AGTCTTCAGATGGTTACGTTTTGTGGGGACAGAGCCATGTCTATGAGAGT
ATGATAACTGGAGAGGCAAGGCCAGTGGCTAAGAGGAAGGGTTATACAGT
AATTGGTGGCACTGTGAATGAGAATGGGGTGCTACATATTAAGGCAACAA
GGGTTGGATCAGAGAGTGCTCTTGCTCAAATTGTTCGACTTGTTGAATCA
GCTCAGATGGCTAAGGCTCCAGTTCAGAAGTTCGCTGATCGTATTTCAAA
ATACTTTGTGCCTCTGGTCATCATCCTGTCATTTTCGACATGGCTTGCTT
GGTTTTTAGCTGGAAAGTTCCATAGCTACCCGGAATCCTGGATACCATCT
TCGATGGATAGCTTTCAGCTTGCACTACAGTTTGGAATCTCTGTTATGGT
CATAGCGTGTCCATGTGCGCTAGGCCTAGCGACTCCAACTGCTGTAATGG
TTGGAACTGGAGTTGGGGCATCTCAAGGAGTACTGATTAAAGGGGGTCAG
GCCTTGGAAAGTGCACATAAGGTGAATTGCATTGTGTTTGACAAAACTGG
AACTCTGACAGTTGGAAAGCCAGTAGTTGTCAGCACAAAGCTTTTGAAAA
ATATGGTACTGAGAGACTTCTATGAAGTTGTTGCTGCAACTGAGGTTAAC
AGTGAGCACCCATTGGCGAAGGCTATTGTTGAATATGCCAAGAA
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