CN188172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCS_SYNE7 (Cation-transporting ATPase pacS OS=Synechococcus elongatus (strain PCC 7942) GN=pacS PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.192e-20 Identity = 49/87 (56.32%), Postives = 63/87 (72.41%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+AIG GTD+AI A+DI L+ +L+ ++TAI LSR T + IR N +A YN+ GIPIAAG L+P G+ L P +AGAAMA Sbjct: 642 LAQADVGIAIGTGTDVAIAASDITLISGDLQGIVTAIQLSRATMTNIRQNLFFAFIYNVAGIPIAAGILYPLLGWLLSPMLAGAAMA 728
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATP7B_RAT (Copper-transporting ATPase 2 OS=Rattus norvegicus GN=Atp7b PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.702e-19 Identity = 47/88 (53.41%), Postives = 66/88 (75.00%), Query Frame = -1 Query: 325 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAA 588 L ADVG+AIG GTD+AI+AAD+VL++++L DV+ +I LS++T RIR+N + AL YN++GIPIAAG P G L PW+ AA ++ Sbjct: 1263 LAQADVGIAIGTGTDVAIDAADVVLIRNDLLDVVASIHLSKRTVRRIRVNLVLALIYNMVGIPIAAGVFMP-IGIVLQPWMGSAAASS 1349
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCU2_RHIME (Copper-transporting ATPase 2 OS=Rhizobium meliloti GN=actP2 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 4.609e-19 Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G GTDIAIE+AD+VLM +L V AI LS+ T I+ N WA YN+ IP+AAG L+P TG L P A AAMA Sbjct: 722 LAEADVGIAVGTGTDIAIESADVVLMSGDLNGVAKAIALSKATILNIKQNLFWAFAYNVSLIPVAAGVLYPVTGILLSPIFAAAAMA 808
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_BACSU (Copper-exporting P-type ATPase A OS=Bacillus subtilis GN=copA PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 6.019e-19 Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AD+GMAIG GTDIA+E ADI L++ +L + AI +SR T I+ N WALGYN LGIPIAA GF L PWIAGAAMA Sbjct: 706 LATADIGMAIGTGTDIAMETADITLIRGDLNSIADAIRMSRLTMKNIKQNLFWALGYNSLGIPIAA------LGF-LAPWIAGAAMA 785
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCS_SYNY3 (Cation-transporting ATPase pacS OS=Synechocystis sp. (strain PCC 6803) GN=pacS PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 6.019e-19 Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+AIG GTD+AI A+DI L+ +L+ ++TAI LSR T IR N +A YN++GIP+AAG +P G L P +AGAAMA Sbjct: 641 LAQADVGIAIGTGTDVAIAASDITLIAGDLQGILTAIKLSRATMGNIRQNLFFAFIYNVIGIPVAAGLFYPLFGLLLNPILAGAAMA 727
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_ARCFU (Probable copper-exporting P-type ATPase B OS=Archaeoglobus fulgidus GN=copB PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.095e-18 Identity = 43/87 (49.43%), Postives = 62/87 (71.26%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+AIGAGTD+A+E ADIVL++++ DV ++LSRKT+S+++ N +WA GYN IP+AAG L+ + G L P + M+ Sbjct: 591 LAQADVGIAIGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKMKQNLLWATGYNAFAIPLAAGVLY-SAGILLSPAVGAILMS 676
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_YERPE (Copper-exporting P-type ATPase A OS=Yersinia pestis GN=copA PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.095e-18 Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G G+DIAIE A I LM+ +L V+ A++LS+ T ++ N + A YN LGIPIAAG L+P TG L P +AGAAMA Sbjct: 855 LAQADVGIAMGGGSDIAIETAAITLMRHSLYGVVDAVELSKATLRNMKQNLLGAFFYNALGIPIAAGILYPFTGTLLSPVVAGAAMA 941
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_VIBCH (Copper-exporting P-type ATPase A OS=Vibrio cholerae GN=copA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18 Identity = 44/87 (50.57%), Postives = 62/87 (71.26%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AD+G+A+G+G+D+AIE+A + L+ S+ V++AI+LS+ T ++ N A YN LGIPIAAG L+P GF L P +AGAAMA Sbjct: 804 LALADIGIAMGSGSDVAIESAQMTLLNSSPTSVVSAIELSKATLRNMKQNLFGAFIYNTLGIPIAAGVLYPAFGFLLSPVVAGAAMA 890
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCU_SINMW (Copper-transporting P-type ATPase OS=Sinorhizobium medicae (strain WSM419) GN=actP PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G GTDIAIE+AD+VLM +L V A+ LS+ T I+ N WA YN+ +P+AAG L+P G L P A AAMA Sbjct: 722 LAEADVGIAVGTGTDIAIESADVVLMSGDLNGVAKALALSKATIRNIKQNLFWAFVYNISLVPVAAGVLYPVNGTLLSPIFAAAAMA 808
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCU1_RHIME (Copper-transporting ATPase 1 OS=Rhizobium meliloti GN=actP1 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18 Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G GTDIAIE+AD+VLM +L V AI LS+ T I+ N WA YN+ +P+AAG L+P G L P +A AAMA Sbjct: 721 LTEADVGIAVGTGTDIAIESADVVLMSGDLIGVPKAIALSKATIRNIKQNLFWAFAYNVSLVPVAAGVLYPLNGTLLSPILAAAAMA 807 The following BLAST results are available for this feature:
BLAST of CN188172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188172 ID=CN188172; Name=CN188172; organism=Citrus sinensis; type=EST; length=588bpback to top |