CN188172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPB_MYCTU (Cation-transporting P-type ATPase B OS=Mycobacterium tuberculosis GN=ctpB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GTD+A+ AADI+L++ +L V A+DL+R T IR+N IWA GYN+ IPIAA L L P IAGAAMA Sbjct: 654 LVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGL-------LNPLIAGAAMA 733
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPB_MYCBO (Cation-transporting P-type ATPase B OS=Mycobacterium bovis GN=ctpB PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GTD+A+ AADI+L++ +L V A+DL+R T IR+N IWA GYN+ IPIAA L L P IAGAAMA Sbjct: 654 LVGADLGLAIGRGTDVALGAADIILVRDDLNTVPQALDLARATMRTIRMNMIWAFGYNVAAIPIAAAGL-------LNPLIAGAAMA 733
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATU2_YEAST (Copper-transporting ATPase OS=Saccharomyces cerevisiae GN=CCC2 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17 Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSN------LEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L +D+G+AI GT+IAIEAADIV++ N L + AID+S KTF RI+LN WAL YN+ IPIA G L P G LPP +AG AMA Sbjct: 846 LALSDLGIAISTGTEIAIEAADIVILCGNDLNTNSLRGLANAIDISLKTFKRIKLNLFWALCYNIFMIPIAMGVLIP-WGITLPPMLAGLAMA 937
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPA_MYCTU (Cation-transporting P-type ATPase A OS=Mycobacterium tuberculosis GN=ctpA PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.303e-17 Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AD+GMAIG GTD+AI AADI+L++ +L+ V A+DL+R T ++LN +WA GYN+ IP+AA L L P +AGAAMA Sbjct: 645 LARADLGMAIGRGTDVAIGAADIILVRDHLDVVPLALDLARATMRTVKLNMVWAFGYNIAAIPVAAAGL-------LNPLVAGAAMA 724
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAHJ (Copper-exporting P-type ATPase A OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.634e-17 Identity = 46/87 (52.87%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+A+G GT++AIEAADI ++ +++ V AI S KT I+ N WA GYN+ GIPIAA L L PWIAGAAMA Sbjct: 698 LVKADIGIAMGTGTEVAIEAADITILGGDIQLVPKAIHASHKTIRNIKQNLFWAFGYNIAGIPIAAMGL-------LAPWIAGAAMA 777
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAES (Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17 Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+GMAIG G ++AIEAADI ++ +L V AI S+ T IR N WA GYN+ GIPIAA L L PWIAGAAMA Sbjct: 697 LVKADIGMAIGTGAEVAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL-------LAPWIAGAAMA 776
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAEQ (Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17 Identity = 48/87 (55.17%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+GMAIG G ++AIEAADI ++ +L V AI S+ T IR N WA GYN+ GIPIAA L L PWIAGAAMA Sbjct: 697 LVKADIGMAIGTGAEVAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGL-------LAPWIAGAAMA 776
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATCU_RHILV (Copper-transporting P-type ATPase OS=Rhizobium leguminosarum bv. viciae GN=actP PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 9.609e-17 Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AADVG+A+G G D+A+E+A I L+K +L ++ A L+ T IR N +A GYN LG+P+AAG L+P G L P IA AAM+ Sbjct: 737 LAAADVGIAMGTGADVAMESAGITLVKGDLTGIVRARRLAEATMRNIRQNLGFAFGYNALGVPVAAGVLYPILGLLLSPMIAAAAMS 823
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPA_MYCLE (Cation-transporting P-type ATPase A OS=Mycobacterium leprae GN=ctpA PE=3 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AD+GMAIG GTD+AI AADI+L++ NL+ V +DL+ T I+ N +WA GYN+ IPIAA L L P +AGAAMA Sbjct: 632 LARADLGMAIGRGTDVAIGAADIILVRDNLDVVPITLDLAAATMRTIKFNMVWAFGYNIAAIPIAAAGL-------LNPLVAGAAMA 711
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAS1 (Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=copA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GT++AIEAAD+ ++ +L + AI S+ T IR N WA GYN+ GIPIAA L L PWIAGAAMA Sbjct: 697 LVQADIGIAIGTGTEVAIEAADVTILGGDLLLIPKAIKASKATIRNIRQNLFWAFGYNVAGIPIAALGL-------LAPWIAGAAMA 776 The following BLAST results are available for this feature:
BLAST of CN188172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188172 ID=CN188172; Name=CN188172; organism=Citrus sinensis; type=EST; length=588bpback to top |