CN188172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAA3 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain USA300) GN=copA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GT++AIEAADI ++ +L + AI S+ T IR N WA GYN+ GIPIAA L L PW+AGAAMA Sbjct: 698 LVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMA 777
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAA2 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain JH1) GN=copA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GT++AIEAADI ++ +L + AI S+ T IR N WA GYN+ GIPIAA L L PW+AGAAMA Sbjct: 698 LVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMA 777
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAA1 (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=copA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.141e-16 Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GT++AIEAADI ++ +L + AI S+ T IR N WA GYN+ GIPIAA L L PW+AGAAMA Sbjct: 698 LVKADIGIAIGTGTEVAIEAADITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMA 777
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPB_MYCLE (Cation-transporting P-type ATPase B OS=Mycobacterium leprae GN=ctpB PE=3 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.652e-16 Identity = 45/87 (51.72%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AD+G+A+G GTD+AI AAD++L++ +L V A+DL+R T IR+N IWA GYN+ IPIA+ L L P IAGAAMA Sbjct: 648 LACADLGLAMGRGTDVAIGAADLILVRDSLGVVPVALDLARATMRTIRINMIWAFGYNVAAIPIASSGL-------LNPLIAGAAMA 727
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: SILP_SALTY (Putative cation-transporting P-type ATPase OS=Salmonella typhimurium GN=silP PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L AADVG+A+G GTD+AIE+A + L+K +L + A LS T IR N +A YN LG+P+AAG L+P G L P IA AAMA Sbjct: 718 LAAADVGIAMGTGTDVAIESAGVTLLKGDLMILNRARHLSEITMKNIRQNLFFAFIYNALGVPVAAGLLYPVYGILLSPVIAAAAMA 804
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_SALTY (Copper-exporting P-type ATPase A OS=Salmonella typhimurium GN=copA PE=1 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G G+D+AIE A I LM+ +L V A+ +SR T ++ N + A YN +GIP+AAG L+P TG L P +AGAAMA Sbjct: 727 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMA 813
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_SALTI (Copper-exporting P-type ATPase A OS=Salmonella typhi GN=copA PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G G+D+AIE A I LM+ +L V A+ +SR T ++ N + A YN +GIP+AAG L+P TG L P +AGAAMA Sbjct: 727 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMA 813
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_ECOLI (Copper-exporting P-type ATPase A OS=Escherichia coli (strain K12) GN=copA PE=1 SV=4) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G G+D+AIE A I LM+ +L V A+ +SR T ++ N + A YN +GIP+AAG L+P TG L P +AGAAMA Sbjct: 728 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLHNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMA 814
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_ECO57 (Copper-exporting P-type ATPase A OS=Escherichia coli O157:H7 GN=copA PE=3 SV=3) HSP 1 Score: 84.3445 bits (207), Expect = 4.769e-16 Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L ADVG+A+G G+D+AIE A I LM+ +L V A+ +SR T ++ N + A YN +GIP+AAG L+P TG L P +AGAAMA Sbjct: 728 LAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWPFTGTLLNPVVAGAAMA 814
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: AHM6_ARATH (Putative copper-transporting ATPase PAA1 OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.229e-16 Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = -1 Query: 331 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAM 588 L +++VG+A+G G A E + +VLM + L ++ A++LSR+T ++ N WA GYN++GIPIAAG L P TG L P +AGA M Sbjct: 816 LASSNVGVAMGGGAGAASEVSPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLLPLTGTMLTPSMAGALM 901 The following BLAST results are available for this feature:
BLAST of CN188172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188172 ID=CN188172; Name=CN188172; organism=Citrus sinensis; type=EST; length=588bpback to top |