CN188172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAAU (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus GN=copB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+GMAIGAGTD+AIE+ D++L+KSN D+I + LS+ T ++ N W GYN++ +P+AAG L + G L P + M+ Sbjct: 571 LIRADIGMAIGAGTDVAIESGDVILVKSNPSDIINFLSLSKNTMKKMVQNLWWGAGYNVIAVPLAAGIL-ASIGLILSPAVGAILMS 656
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAAR (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain MRSA252) GN=copB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.062e-15 Identity = 39/87 (44.83%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+GMAIGAGTD+AIE+ D++L+KSN D+I + LS+ T ++ N W GYN++ +P+AAG L + G L P + M+ Sbjct: 580 LIRADIGMAIGAGTDVAIESGDVILVKSNPSDIINFLSLSKNTMKKMVQNLWWGAGYNVIAVPLAAGIL-ASIGLILSPAVGAILMS 665
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPA_STAAB (Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=copA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.388e-15 Identity = 45/87 (51.72%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 LV AD+G+AIG GT++AIEAA I ++ +L + AI S+ T IR N WA GYN+ GIPIAA L L PW+AGAAMA Sbjct: 698 LVKADIGIAIGTGTEVAIEAAGITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL-------LAPWVAGAAMA 777
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: CTPV_MYCTU (Probable cation-transporting ATPase V OS=Mycobacterium tuberculosis GN=ctpV PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.367e-15 Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 331 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAA-GALFPTTGFRLPPWIAGAAM 588 LV AD+G+AIG GTD+AIEA+DI LM L+ V+ AI+LSR+T I N WA GYN IP+AA GAL P +AGAAM Sbjct: 668 LVQADLGIAIGTGTDVAIEASDITLMSGRLDGVVRAIELSRQTLRTIYQNLGWAFGYNTAAIPLAALGALNPV--------VAGAAM 746
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATSY_SYNP6 (Probable copper-transporting ATPase synA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.175e-14 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L A VG+++ AG+DIA ++A ++L + L+ V+ A +LS+ IR N WALGYN++ +P+AAGA P G L P IAGA MA Sbjct: 677 LATAAVGISLAAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAGAFLPAYGLALTPAIAGACMA 763
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: ATSY_SYNE7 (Probable copper-transporting ATPase synA OS=Synechococcus elongatus (strain PCC 7942) GN=synA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.175e-14 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L A VG+++ AG+DIA ++A ++L + L+ V+ A +LS+ IR N WALGYN++ +P+AAGA P G L P IAGA MA Sbjct: 677 LATAAVGISLAAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLPLAAGAFLPAYGLALTPAIAGACMA 763
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAHJ (Probable copper-transporting P-type ATPase B OS=Staphylococcus haemolyticus (strain JCSC1435) GN=copB PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 38/87 (43.68%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+G+AIGAGTD+A+++ DI+L+KSN D+I + LS T ++ N W GYN++ +P+AAGAL G L P + M+ Sbjct: 573 LIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIIHFLTLSNNTMRKMVQNLWWGAGYNIVAVPLAAGAL-AFIGLILSPAVGAILMS 658
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAES (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copB PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 37/87 (42.53%), Postives = 57/87 (65.52%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+G+AIGAGTD+A+++ DI+L+KSN D++ + LS T ++ N W GYN++ +P+AAGAL G L P + M+ Sbjct: 573 LIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIVHFLTLSNNTMRKMVQNLWWGAGYNIVAVPLAAGAL-AFVGLILSPAVGAILMS 658
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAEQ (Probable copper-transporting P-type ATPase B OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copB PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+G+AIGAGTD+A+++ DI+L+KSN D+I + LS T ++ N W GYN++ +P+AAG L G L P I M+ Sbjct: 573 LIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIIHFLTLSNNTMRKMVQNLWWGAGYNIVAVPLAAGIL-AFIGLILSPAIGAILMS 658
BLAST of CN188172 vs. ExPASy Swiss-Prot
Match: COPB_STAAT (Probable copper-transporting P-type ATPase B OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 38/87 (43.68%), Postives = 56/87 (64.37%), Query Frame = -1 Query: 328 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMA 588 L+ AD+G+AIGAGTD+A+++ DI+L+KSN D+I + LS T ++ N W GYN++ +P+AAG L G L P I M+ Sbjct: 573 LIRADIGIAIGAGTDVAVDSGDIILVKSNPSDIIHFLTLSNNTMRKMVQNLWWGAGYNIVAVPLAAGIL-AFIGLILSPAIGAILMS 658 The following BLAST results are available for this feature:
BLAST of CN188172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188172 ID=CN188172; Name=CN188172; organism=Citrus sinensis; type=EST; length=588bpback to top |