EY666008

Overview
NameEY666008
Unique NameEY666008
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_STRPN (Penicillin-binding protein 1A OS=Streptococcus pneumoniae GN=ponA PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.009e-14
Identity = 55/176 (31.25%), Postives = 85/176 (48.30%), Query Frame = 3
Query:   39 DQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERGGSIRGASTLSQQVSKNLFLWTGRS---YFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSA-SHPTSYVARRAAWIRQQMSQ--LGGDSYLNELN 548
            + I  +L  A+++ ED RF  H G D   I  A L N +  S++G STL+QQ+ K  +  T  S     RK  EAW    +E    KQ IL  Y+N V    G +G + AA++++G     L+  Q + LA +   P  +   SHP +   RR   + +  +Q  +  + Y   +N
Sbjct:   77 NDIPTDLVKAIVSIEDHRFFDHRGIDTIRILGAFLRNLQSNSLQGGSTLTQQLIKLTYFSTSTSDQTISRKAQEAWLAIQLEQKATKQEILTYYINKVYMSNGNYGMQTAAQNYYGKDLNNLSLPQLALLAGMPQAPNQYDPYSHPEAAQDRRNLVLSEMKNQGYISAEQYEKAVN 252          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_HAEIN (Penicillin-binding protein 1A OS=Haemophilus influenzae GN=mrcA PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 3
Query:   66 AVMAGEDQRFPQHWGFDFDAIQAAL-LHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSASHPTSYVARRAAWIRQQMSQLGGDSYLNE 542
            A +A ED RF  H G D   I  AL +    GG+ +GAST++QQ+++N FL + ++  RK  EA     IE    KQ ILE+YLN +      +G  AAA+ +FG S   LT  + + +A +   P+  S  +P   + R        +S++  + Y+++
Sbjct:   70 AFLATEDSRFYDHHGLDPIGIARALFVAVSNGGASQGASTITQQLARNFFLTSEKTIIRKAREAVLAVEIENTLNKQEILELYLNKIFLGYRSYGVAAAAQTYFGKSLNELTLSEMAIIAGL---PKAPSTMNPLYSLKRSEERRNVVLSRMLDEKYISK 226          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOBL (Penicillin-binding protein 1A OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=pbpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   18 QRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHN-----ERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVAR 482
            QR  V +  +   LK A ++ ED+RF +H G D       +L N     +R   ++GASTL+QQ+ KN  L +  S  RK  E + +  +E    K  IL  Y+NS+       G EAA++ +F  S K L+  + +++A V  +P V+      S  +P+ Y+ R
Sbjct:   75 QRIVVDYKNVPQNLKNAFVSIEDERFYKHHGVDIKRFTGVILINVTNKIKRSSKLQGASTLTQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASKQYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNR 240          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOBH (Penicillin-binding protein 1A OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=pbpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   18 QRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHN-----ERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVAR 482
            QR  V +  +   LK A ++ ED+RF +H G D       +L N     +R   ++GASTL+QQ+ KN  L +  S  RK  E + +  +E    K  IL  Y+NS+       G EAA++ +F  S K L+  + +++A V  +P V+      S  +P+ Y+ R
Sbjct:   75 QRIVVDYKNVPQNLKNAFVSIEDERFYKHHGVDIKRFTGVILINVTNKIKRSSKLQGASTLTQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASKQYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNR 240          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOB1 (Penicillin-binding protein 1A OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=pbpA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 3
Query:   18 QRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHN-----ERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVAR 482
            QR  V +  +   LK A ++ ED+RF +H G D       +L N     +R   ++GASTL+QQ+ KN  L +  S  RK  E + +  +E    K  IL  Y+NS+       G EAA++ +F  S K L+  + +++A V  +P V+      S  +P+ Y+ R
Sbjct:   75 QRIVVDYKNVPQNLKNAFVSIEDERFYKHHGVDIKRFTGVILINVTNKIKRSSKLQGASTLTQQLIKNTVLSSEVSIKRKVQEMYLSIQLEKELSKDEILGAYMNSIFLGGNALGVEAASKQYFNKSVKDLSLIECAFIAGVPQSPSVYYPYSSASKKNPSIYLNR 240          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: MGT_STAES (Monofunctional glycosyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mgt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 3
Query:    9 IDVQRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSA-------KALTRQQASYLAAVLPNPRVWSASHPTSYVARRAAWIRQQMSQ 515
            I+ +  +V  + + + +K A ++ ED+RF +H GFD      AL        ++G ST++QQV KN +    RS+ RK  E +    +E  + K +IL  Y+N++ + +  +  E AA H+FGV+          ++  Q++ LA+ +  P V+  +  ++    R     ++M Q
Sbjct:   76 IENKSDFVATENMPNYVKGAFISMEDERFYKHHGFDIKGTTRALFSTISDRDVQGGSTITQQVVKNYYYDNERSFTRKIKELFVARKVEKQYSKNQILSFYMNNIYYGDNQYTVEGAANHYFGVTVDKNNSNMSQISVLQSAILASKVNAPSVYDVNDMSNNYINRVKTNLEKMKQ 251          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: MGT_STAEQ (Monofunctional glycosyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mgt PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 48/176 (27.27%), Postives = 89/176 (50.57%), Query Frame = 3
Query:    9 IDVQRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSA-------KALTRQQASYLAAVLPNPRVWSASHPTSYVARRAAWIRQQMSQ 515
            I+ +  +V  + + + +K A ++ ED+RF +H GFD      AL        ++G ST++QQV KN +    RS+ RK  E +    +E  + K +IL  Y+N++ + +  +  E AA H+FGV+          ++  Q++ LA+ +  P V+  +  ++    R     ++M Q
Sbjct:   76 IENKSDFVATENMPNYVKGAFISMEDERFYKHHGFDIKGTTRALFSTISDRDVQGGSTITQQVVKNYYYDNERSFTRKIKELFVARKVEKQYSKNQILSFYMNNIYYGDNQYTVEGAANHYFGVTVDKNNSNMSQISVLQSAILASKVNAPSVYDVNDMSNNYINRVKTNLEKMKQ 251          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPB_HAEIN (Penicillin-binding protein 1B OS=Haemophilus influenzae GN=mrcB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 52/159 (32.70%), Postives = 88/159 (55.35%), Query Frame = 3
Query:   81 EDQRFPQHWGFDFDAIQAALLHNERGG-SIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSV----EWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSA-SHPTSYVARRAAWIRQQM--SQLGGDSY 533
            ED+RF +H G +   I  AL+ N R G +++G STL+QQ+ KNLFL   R+  RK  EA  + +++  + K RILE YLN +      D  + G E A++ +FG S + ++  Q + L  ++  P +++   +P + + RR   +R  +    +G + Y
Sbjct:  188 EDRRFYEHNGINPVGILRALIANIRAGQTVQGGSTLTQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLRLMLEHKMIGDELY 346          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_XYLFT (Penicillin-binding protein 1A OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=mrcA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 3
Query:   12 DVQRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAA--LLHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSASHPTSYVA----RRAAWIRQQMSQL 518
            +++R  V   ++ ++LK A +A ED RF +H G D+  I  A  LL       + G ST++QQV++  FL +  SY RK  E      IE    K  ILE+YLN   +    +G  AAA  ++G     L   + + LA +   P+  S+ +P +  A    RR  ++ Q+M  L
Sbjct:   67 EIRRYPVQIKEVPEQLKQAFLATEDARFYEHSGIDYKGIARAIWLLATTNEKRVPGGSTITQQVARQFFLNSEYSYKRKLAEILLARKIESQLKKDEILELYLNKSFFGNRAYGIAAAAEFYYGKKLNELNLDEMASLAGI---PKFPSSGNPITNPARARERRDLYVLQRMVDL 238          
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_XYLFA (Penicillin-binding protein 1A OS=Xylella fastidiosa GN=mrcA PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 56/175 (32.00%), Postives = 87/175 (49.71%), Query Frame = 3
Query:   12 DVQRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAA--LLHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSASHPTSYVA----RRAAWIRQQMSQL 518
            +++R  V   ++ ++LK A +A ED RF +H G D+  I  A  LL       + G ST++QQV++  FL +  SY RK  E      IE    K  ILE+YLN   +    +G  AAA  ++G     L   + + LA +   P+  S+ +P +  A    RR  ++ Q+M  L
Sbjct:   67 EIRRYPVQIKEVPEQLKQAFLATEDARFYEHSGIDYKGIARAIWLLATTNEKRVPGGSTITQQVARQFFLNSEYSYKRKLAEILLARKIESQLKKDEILELYLNKSFFGNRAYGIAAAAEFYYGKKLNELNLDEMASLAGI---PKFPSSGNPITNPARARERRDLYVLQRMVDL 238          
The following BLAST results are available for this feature:
BLAST of EY666008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 226
Match NameE-valueIdentityDescription
PBPA_STRPN7.009e-1431.25Penicillin-binding protein 1A OS=Streptococcus pne... [more]
PBPA_HAEIN1.196e-1333.13Penicillin-binding protein 1A OS=Haemophilus influ... [more]
PBPA_CLOBL1.196e-1331.93Penicillin-binding protein 1A OS=Clostridium botul... [more]
PBPA_CLOBH1.196e-1331.93Penicillin-binding protein 1A OS=Clostridium botul... [more]
PBPA_CLOB11.196e-1331.93Penicillin-binding protein 1A OS=Clostridium botul... [more]
MGT_STAES1.196e-1327.27Monofunctional glycosyltransferase OS=Staphylococc... [more]
MGT_STAEQ1.196e-1327.27Monofunctional glycosyltransferase OS=Staphylococc... [more]
PBPB_HAEIN1.561e-1332.70Penicillin-binding protein 1B OS=Haemophilus influ... [more]
PBPA_XYLFT1.561e-1332.00Penicillin-binding protein 1A OS=Xylella fastidios... [more]
PBPA_XYLFA1.561e-1332.00Penicillin-binding protein 1A OS=Xylella fastidios... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666008 ID=EY666008; Name=EY666008; organism=Citrus sinensis; type=EST; length=884bp
GCGAGCCGATTGACGTACAGCGCACCTGGGTGCCGTGGGATCAGATCTCC
GACGAGCTTAAAGTGGCGGTGATGGCGGGCGAAGACCAGCGCTTCCCGCA
GCATTGGGGTTTTGATTTCGACGCGATCCAGGCGGCGTTGCTGCATAACG
AGCGCGGCGGTTCGATTCGCGGCGCCAGCACCTTGAGCCAGCAGGTGTCG
AAGAACCTGTTTTTGTGGACCGGACGCAGCTATTTCCGCAAGGGCCTGGA
AGCCTGGTTTACCGGGCTGATCGAGATTCTCTGGCCCAAGCAGCGAATTC
TTGAGGTCTACCTCAACAGCGTGGAATGGGATGAAGGCGTGTTCGGCGCC
GAAGCGGCAGCGCGGCATCATTTTGGGGTGAGTGCCAAGGCGCTGACCCG
CCAGCAGGCCAGCTACCTGGCGGCGGTGCTGCCTAACCCACGGGTGTGGA
GCGCCAGCCATCCAACATCGTATGTGGCGCGACGGGCGGCGTGGATTCGG
CAGCAGATGAGTCAGTTGGGTGGCGACAGCTACCTGAATGAGCTGAACAA
CTCGCGCAAGGCGCCTTGGGCTGACTGACACCCCCCAAAGCAACTGCAAG
AACTGGGCCGCGAGGCCGTTGCGTCACCGCATCCCCAATCAACACGCGGG
GGGAGGCGGAGCGCGGGGCGGGACGAGAGGAGTGTCACGGCGTCCGCCGG
CGCCGGGCGGGGCGGGGGGATGGTGGGTGCCGCGGCGGGGGTGAGGGGGG
GGGGAGACGGGGGCGACCGCCCGGCAATCGGTAGGTATGACCACGCTGCG
CGGGCACTCAGCGCCGCAGACGGCGGGGCCGCACCCCGAGCCGGCCGGCC
CCGGGCGGCGCGGGGGGGGCGGCGGGTCCGCCGT
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