EY666008
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_STRR6 (Penicillin-binding protein 1A OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=pbpA PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 54/176 (30.68%), Postives = 84/176 (47.73%), Query Frame = 3 Query: 39 DQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERGGSIRGASTLSQQVSKNLFLWTGRS---YFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVWSA-SHPTSYVARRAAWIRQQMSQ--LGGDSYLNELN 548 + I +L A+++ ED RF H G D I A L N + S++G S L+QQ+ K + T S RK EAW +E KQ IL Y+N V G +G + AA++++G L+ Q + LA + P + SHP + RR + + +Q + + Y +N Sbjct: 77 NDIPTDLVKAIVSIEDHRFFDHRGIDTIRILGAFLRNLQSNSLQGGSALTQQLIKLTYFSTSTSDQTISRKAQEAWLAIQLEQKATKQEILTYYINKVYMSNGNYGMQTAAQNYYGKDLNNLSLPQLALLAGMPQAPNQYDPYSHPEAAQDRRNLVLSEMKNQGYISAEQYEKAVN 252
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: MGT_STAS1 (Monofunctional glycosyltransferase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=mgt PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13 Identity = 51/178 (28.65%), Postives = 87/178 (48.88%), Query Frame = 3 Query: 9 IDVQRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERGGSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSA-------KALTRQQASYLAAVLPNPRVWSASHPTSYVARRAAWIRQQMSQLG 521 I + ++V + D K A +A ED+RF +H GFD AL S++G ST++QQV KN + +S RK E + +E + K IL Y+N++ + + E+AA H+FGV+ ++ Q++ LA+ + P V++ + + R ++M Q G Sbjct: 77 ITEKESFVYASDMRDYTKGAFIAMEDERFYKHHGFDVKGTSRALFSTLSDKSVQGGSTITQQVVKNYYYDNEQSITRKIKELFVAHRVEKEYDKNEILSFYMNNIYYGSDQYTIESAANHYFGVTTDKNNPNLPQISVLQSAILASKINAPSVYNINDMSDNFTNRVKTDLEKMKQQG 254
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOPE (Penicillin-binding protein 1A OS=Clostridium perfringens GN=pbpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 18 QRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERG-----GSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVARRAAWI--RQQMSQLGGDSYLNELN 548 QR V ++I D LK A +A ED+RF +H G D I + N +G +++GAST++QQ+ KN L SY RK E + +E K IL YLN++ +G AAA+ F + L + +YL + P + + +P+ Y+ R + + ++ + + Y + +N Sbjct: 90 QRYVVKSEEIPDNLKKAFVAIEDERFYEHKGIDIKRIFGVIASNIKGKLSGSNTVQGASTITQQLIKNAVLTNEVSYERKIKEMYLALELEKHLSKDEILTTYLNTIPMGGYQYGVSAAAQRFFSKNVSDLNLVECAYLGGLTQAPTSYDGLSEANKENPSRYLNRTKSVLFKMHELGYISSEQYNDAIN 279
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOP1 (Penicillin-binding protein 1A OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=pbpA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13 Identity = 54/190 (28.42%), Postives = 90/190 (47.37%), Query Frame = 3 Query: 18 QRTWVPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERG-----GSIRGASTLSQQVSKNLFLWTGRSYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVARRAAWI--RQQMSQLGGDSYLNELN 548 QR V ++I D LK A +A ED+RF +H G D I + N +G +++GAST++QQ+ KN L SY RK E + +E K IL YLN++ +G AAA+ F + L + +YL + P + + +P+ Y+ R + + ++ + + Y + +N Sbjct: 90 QRYVVKSEEIPDNLKKAFVAIEDERFYEHKGIDIKRIFGVIASNIKGKLSGSNTVQGASTITQQLIKNAVLTNEVSYERKIKEMYLALELEKHLSKDEILTTYLNTIPMGGYQYGVSAAAQRFFSKNVSDLNLVECAYLGGLTQAPTSYDGLSEANKENPSRYLNRTKSVLFKMHELGYISSEQYNDAIN 279
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLOAB (Penicillin-binding protein 1A OS=Clostridium acetobutylicum GN=pbpA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11 Identity = 56/190 (29.47%), Postives = 95/190 (50.00%), Query Frame = 3 Query: 57 LKVAVMAGEDQRFPQHWGFDFDAIQAALLHN-----ERGGSIRGASTLSQQVSKNLFLWTGR-----SYFRKGLEAWFTGLIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVARR--AAWIRQQMSQLGGDSY---LNELNNSRKA 563 L A ++ ED+RF +H G D I A ++ + SI+GAST++QQ+ KN S+ RK EA+ + +E K +ILE Y+N++ G EAA+R +F SAK L + +++A + +P + A +P Y+ R + +Q + + +Y +N+LNN++ A Sbjct: 105 LSNAFVSIEDERFYKHSGIDTKRILGAFYNDIKSKIHKQNSIQGASTITQQLIKNRMFLNDSLENRISFKRKIQEAYLSIKLEQSLSKSQILEAYMNTIFLGVQANGVEAASRQYFNKSAKDLNLIECAFIAGLAQSPSAYYPFSQNVAKNPNIYLDRTKLVLYKMRQNNYIDFSTYQNAINDLNNNKLA 294
BLAST of EY666008 vs. ExPASy Swiss-Prot
Match: PBPA_CLONN (Penicillin-binding protein 1A OS=Clostridium novyi (strain NT) GN=pbpA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11 Identity = 62/221 (28.05%), Postives = 105/221 (47.51%), Query Frame = 3 Query: 30 VPWDQISDELKVAVMAGEDQRFPQHWGFDFDAIQAALLHNERG-----GSIRGASTLSQQVSKNLFLWT-GRSY---FRKGLEAWFTG-LIEILWPKQRILEVYLNSVEWDEGVFGAEAAARHHFGVSAKALTRQQASYLAAVLPNPRVW------SASHPTSYVARRAAWIRQQ-----MSQLGGDSYLNELNNSRKAPWAD*HPPKQLQELGREAVASP 629 V +D++ + L A ++ ED+RF +H G D I A L + + +++GAST++QQ+ KN T G S R+ ++ W+ +E K+ I+E YLN++ G AAA +F VS L Q +++A + +P V+ S P+ Y+ R + + +SQ S L EL+ S+ D + +Q LG+ + P Sbjct: 93 VKYDEVPENLINAFVSIEDERFFKHSGIDVKRIAGAFLIDMKNIVSGKPALQGASTITQQLIKNTVFETHGNSLNDKLRRKVQEWYLAPKLEKEVGKKSIMEAYLNTIYLGGRAIGVGAAADQYFNVSIDKLDLVQCAFIAGLPQSPSVYYPYSRTSKKDPSKYINRTKTVLAKMKENGYISQNEYISALAELDTSKSTVTND----ESIQTLGQYTIHKP 309 The following BLAST results are available for this feature:
BLAST of EY666008 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 226
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666008 ID=EY666008; Name=EY666008; organism=Citrus sinensis; type=EST; length=884bpback to top |