CN188156

Overview
NameCN188156
Unique NameCN188156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6139 contig Csv1_Contig6139:592..1328. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27
Identity = 67/183 (36.61%), Postives = 100/183 (54.64%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDE----NPPKYKAKKFKDY 723
            P+    YR V  ++ K + ++ ++L              LK    G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD RWID   + +++V+++GDQ+E+++NGKYK+V+HR    KD TRMS   F  P  D ++ P P LVD E    N   Y    F DY
Sbjct:  104 PDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGTRMSLASFYNPGNDALIYPAPALVDKEAEEHNKQVYPKFMFDDY 286          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_DIOKA (1-aminocyclopropane-1-carboxylate oxidase OS=Diospyros kaki GN=DK-ACO1 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 69/184 (37.50%), Postives = 102/184 (55.43%), Query Frame = -1
Query:  178 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKL 723
            P+    YR V +++A+ + ++ + L              LK+A  G     +  K+  YPPCP+ DL  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + +++VI++GDQ+E+++NGKYK+VLHR     D TRMS   F  P  D V+ P P LV+ E   K    KF    Y KL
Sbjct:  104 PDLDEEYRRVMKDFAERLEKLAEYLLDLLCENLGLEKGYLKKAFYGTKGPNFGTKVANYPPCPKADLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVVAQTDGTRMSIASFYNPGNDAVIYPAPALVEKEVEEKEVYPKFVFDDYMKL 287          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_ACTDE (1-aminocyclopropane-1-carboxylate oxidase OS=Actinidia deliciosa GN=ACO PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 69/185 (37.30%), Postives = 104/185 (56.22%), Query Frame = -1
Query:  178 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVP-NEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVD-DENPPKYKAKKFKDYSYCKL 723
            P+    +R   +E+A+ + ++ ++L              LK+A  G     +  K++ YPPCPRP+L  G+ AHTD   + +L   N+V GLQ+ KD  WID   + +++VI+IGDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LVD +E+  K    KF    Y KL
Sbjct:  104 PDLEQDHRKAMKEFAEKLEKLAEQLLDLLCENVGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPRPELIKGLRAHTDAGGIILLFQDNKVSGLQLLKDGEWIDVPPMKHSIVINIGDQLEVITNGKYKSVMHRVIAQPDGNRMSIASFYNPGSDAVMYPAPALVDKEEDQQKQVYPKFVFEDYMKL 288          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27
Identity = 66/182 (36.26%), Postives = 103/182 (56.59%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 723
            P+    YR V  ++AK + ++ ++L              LK A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD++WID   + +++V+++GDQ+E+++NGKYK+VLHR     D TRMS   F  P +D V+ P   LV+   +E+   Y    F DY
Sbjct:  104 PDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVLHRVIAQTDGTRMSLASFYNPGSDAVIYPAKTLVEKEAEESTQVYPKFVFDDY 285          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.399e-27
Identity = 65/181 (35.91%), Postives = 100/181 (55.25%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDD--ENPPKYKAKKFKDY 723
            P+    YR   +E+A  + ++ +KL              LK+A  G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD  W+D   + +++VI++GDQIE+++NGKYK+++HR     D TRMS   F  P  D  + P P L+++  E  P Y    F DY
Sbjct:  104 PDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDVPPVHHSIVINLGDQIEVITNGKYKSIMHRVIAQSDGTRMSIASFYNPGDDAFISPAPALLEEKSEVSPTYPKFLFDDY 284          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27
Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = -1
Query:  202 WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIE---YMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKF 726
            WP+NPP +    +EY + +R++ +K+              +K+A  GD      +  K+++YPPCPR DL  G+ AHTD   + +L  ++ V GLQ+ KD RWID + + +A+VI+ GDQIE+LSNG+YK+  HR   +    R S   F  P     + P      +E  P     KF
Sbjct:  101 WPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADAIVINTGDQIEVLSNGRYKSAWHRVLATSHGNRRSIASFYNPSLKATIAPAAGAATEEAAPPALYPKF 279          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26
Identity = 65/180 (36.11%), Postives = 101/180 (56.11%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLV-DDENPPKYKAKKFKDY 723
            P+    YR V +E+A  + E+ ++L              LK+A  G     +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KDD+WID   + +++VI++GDQ+E+++NGKYK+V+HR     D  RMS   F  P  D V+ P   L+ ++E    Y    F DY
Sbjct:  104 PDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEVITNGKYKSVMHRVIAQTDGARMSIASFYNPGDDAVISPASTLLKENETSEVYPKFVFDDY 283          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26
Identity = 68/195 (34.87%), Postives = 105/195 (53.85%), Query Frame = -1
Query:  172 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEA-AGGDD--IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKK-------FKDYSYCKLNK 723
            P+     R+  +E+A  +  + ++L              LK+   GG D    +  K++ YPPCP+P+L  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + +++V++IGDQ+E+++NGKYK+VLHR     D  RMS   F  P +D V+ P P LV+ E   K + KK       F+DY    + K
Sbjct:  106 PDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPVRHSIVVNIGDQLEVITNGKYKSVLHRVVAQTDGNRMSIASFYNPGSDAVIFPAPALVEKEAEEKEEKKKEIYPKFVFQDYMNLYIRK 300          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26
Identity = 65/182 (35.71%), Postives = 102/182 (56.04%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAA-GGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVD---DENPPKYKAKKFKDY 723
            P+    YR V  ++AK + ++ ++L              LK+   G     +  K++ YPPCP+PDL  G+ AHTD   + +L  ++ V GLQ+ KD +WID   +  ++V+++GDQ+E+++NGKYK+V+HR     D TRMS   F  P +D V+ P P LV+   +E+   Y    F DY
Sbjct:  104 PDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPMRLSIVVNLGDQLEVITNGKYKSVMHRVITQTDGTRMSLASFYNPGSDAVIFPAPTLVEKEAEESKAIYPKFVFDDY 285          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26
Identity = 65/184 (35.33%), Postives = 102/184 (55.43%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDI---EYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPK---YKAKKFKDY 723
            P+    +R V +E+A+ + ++ +++              LK A  G       +  K++ YPPCPRP+L  G+ AHTD   L +L  ++ V GLQ+ KD  W+D   + +++VI++GDQ+E+++NGKYK+V+HR     D  RMS   F  P +D V+ P P LV+ E   K   Y    F+DY
Sbjct:  103 PDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPMNHSIVINLGDQVEVITNGKYKSVMHRVVAQTDGNRMSLASFYNPGSDAVIFPAPALVEKEAEEKKEVYPKFVFEDY 286          
The following BLAST results are available for this feature:
BLAST of CN188156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ACCO2_SOLLC2.424e-2736.611-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO_DIOKA4.134e-2737.501-aminocyclopropane-1-carboxylate oxidase OS=Diosp... [more]
ACCO_ACTDE4.134e-2737.301-aminocyclopropane-1-carboxylate oxidase OS=Actin... [more]
ACCO1_SOLLC4.134e-2736.261-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO2_MALDO5.399e-2735.911-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]
ACCO_MUSAC9.209e-2735.201-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]
ACCO_PEA3.500e-2636.111-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO1_DORSP3.500e-2634.871-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO_TOBAC4.571e-2635.711-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PERAE4.571e-2635.331-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188156 ID=CN188156; Name=CN188156; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTAACATTAAGGATTATTTATTATTGCTAATACCCGCGATTACA
TTTCAGAAACAAGATCGCAACAACAAACAAGAATCGATAAACGTACAGTG
ACGAGATAAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATA
ATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCT
TGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGA
GGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCA
CGACATTCTCGTCTTGTCCTTGCTAACAGTGGTTCTATGCAGCACAGCTT
TGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGACG
AGAGCGTTGGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGAC
TTGCAGACCAGGAACTTCATTGGGAACAAGAACGGTGAGGGCAGAAAGAT
CAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGA
TAATAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTC
TTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACA
ACTTATCCACCACCTCCCTCATGTACTTTGCGTACTCCTCATTCACCGCT
CGGTAAGAAGGAGGGTTGTTGGGCCAGAAGCGGTAGTT
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