CN188156

Overview
NameCN188156
Unique NameCN188156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 52/133 (39.10%), Postives = 81/133 (60.90%), Query Frame = -1
Query:  187 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSY 585
            ++ + ++++N+YPPC  PDL LG   H D S+LT+L  + V GLQVF D++W   +  P A V++IGD    LSNG +K+ LHR  V+++  R S   FL P  D VV P   +++     K K +K+ D+++
Sbjct:  219 EENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQDHVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFFLCPKKDKVVKPPSDILE-----KMKTRKYPDFTW 346          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.066e-22
Identity = 62/199 (31.16%), Postives = 102/199 (51.26%), Query Frame = -1
Query:  172 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDD--RWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPL-----PQLVDDEN---PPKYKAKKFKDYSYCKLNK 738
            +Y  WP+ P  + AV ++Y++ + E+  KL              L +A    D++  + +N+YP CP PDL LG+  HTD   +T+L+ ++V GLQ  KD+   WI  + +  A V+++GD    LSNG++K   H+  V+ + +R+S   F  P  + +V PL      + + DE       Y+ K  KD    +L K
Sbjct:  145 DYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACV--DMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQDQVGGLQATKDNGKTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEAIVYPLKIREGEKSIMDEPITFAEMYRRKMSKDLELARLKK 341          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.004e-22
Identity = 58/189 (30.69%), Postives = 97/189 (51.32%), Query Frame = -1
Query:  181 WPNNPPSYRAVNEEYAKYMREVVDKLF-----TYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDR-WIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPA-DTVVGPLPQLVDDENPPKYKAKKFKDYSYCK 726
            WP++   Y  + +EY   M ++  +L      +              E +G       +++N+YP CP P+ A+G+ AHTD + LT+L  +   GLQVF+++  W+  +  P  LV++IGD   ILSNGK  +V+HR  V+  ++R+S       PA D  + P+ +L     P  Y++  +K+Y   K
Sbjct:  149 WPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIK 337          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21
Identity = 62/200 (31.00%), Postives = 100/200 (50.00%), Query Frame = -1
Query:  169 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDD----ENP----PKYKAKKFKDYSYCKLNKL 738
            +Y  WP+ P  +R+V +EY++ +  +  KL              L  A    D++  + +N+YP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A V+++GD    LSNG++K   H+  V+ + +R+S   F  P  +  V PL     +    E P      Y+ K  KD    +L KL
Sbjct:  143 DYSRWPDKPEGWRSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACV--DMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNHSRLSIATFQNPAPEATVYPLKIREGEKAVLEGPITFAEMYRRKMSKDLELARLKKL 340          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.987e-21
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = -1
Query:  217 DDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 585
            ++ + ++++NYYPPC +PDL LG   H D ++LT+L  + V GLQVF +++W   +  P A V++IGD    LSN +YK+ LHR  V+ +  R S   FL P  D VV P  +L+D     +Y
Sbjct:  221 EENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQDHVNGLQVFVENQWRSIRPNPKAFVVNIGDTFMALSNDRYKSCLHRAVVNSESERKSLAFFLCPKKDRVVTPPRELLDSITSRRY 343          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 55/164 (33.54%), Postives = 86/164 (52.44%), Query Frame = -1
Query:  253 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPL 738
            +Y  WP+ P  +  V EEY+  +  +   L              L +A    D++  + +NYYP CP+PDL LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +P A V+++GD    LSNG++K   H+  V+ + +R+S   F  P  D  V PL
Sbjct:  143 DYTRWPDKPEGWIKVTEEYSNKLMTLACTLLGVLSEAMGLELEALTKACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPL 304          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21
Identity = 55/179 (30.73%), Postives = 94/179 (52.51%), Query Frame = -1
Query:  193 PNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDD-IEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNE-VPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 723
            P+    YR   +++ K +  + + L              LK+   G     +  K++ YP CP+P++  G+ AHTD   + +L  ++ V GLQ+ KD  WID   + +++VI++GDQ+E+++NG+YK+++HR    K+  RMS   F  P +D  + P   L   E   +Y +  F DY
Sbjct:  107 PDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPLNHSIVINLGDQLEVITNGRYKSMMHRVVTQKEGNRMSIASFYNPGSDAEISPASSLACKET--EYPSFVFDDY 283          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.551e-21
Identity = 62/200 (31.00%), Postives = 98/200 (49.00%), Query Frame = -1
Query:  169 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLP----QLVDDENP----PKYKAKKFKDYSYCKLNKL 738
            +Y  WP+ P  +R++ E Y+  +  +  KL              L +A    D++  + +NYYP CP+P+L LG+  HTD   +T+L+ ++V GLQ  +D    WI  + +  A V+++GD    LSNG++K   H+  V+ + +RMS   F  P  +  V PL     +    E P      YK K  +D     L KL
Sbjct:  143 DYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACV--DMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQDQVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFKNADHQAVVNSNSSRMSIATFQNPAPNATVYPLKIREGEKAVMEEPITFAEMYKRKMSRDIEMATLKKL 340          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = -1
Query:  217 YRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 705
            +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A V++IGD    LSNG+YK+ LHR  V+    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  157 HRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.288e-20
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = -1
Query:  217 YRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 705
            +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A V++IGD    LSNG+YK+ LHR  V+    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  157 HRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDASNPRAY 320          
The following BLAST results are available for this feature:
BLAST of CN188156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
GAOX2_ARATH3.066e-2239.10Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
FL3H_PETHY3.066e-2231.16Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
G3OX4_ARATH4.004e-2230.69Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
FL3H_VITVI1.165e-2131.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
GAOX1_ARATH1.987e-2140.65Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
FL3H_DIACA2.595e-2133.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
ACCO1_BRAJU2.595e-2130.731-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
FL3H_PETCR7.551e-2131.00Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
GAO1B_WHEAT9.862e-2136.53Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1A_WHEAT1.288e-2036.53Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188156 ID=CN188156; Name=CN188156; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTAACATTAAGGATTATTTATTATTGCTAATACCCGCGATTACA
TTTCAGAAACAAGATCGCAACAACAAACAAGAATCGATAAACGTACAGTG
ACGAGATAAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATA
ATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCT
TGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGA
GGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCA
CGACATTCTCGTCTTGTCCTTGCTAACAGTGGTTCTATGCAGCACAGCTT
TGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGACG
AGAGCGTTGGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGAC
TTGCAGACCAGGAACTTCATTGGGAACAAGAACGGTGAGGGCAGAAAGAT
CAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGA
TAATAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTC
TTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACA
ACTTATCCACCACCTCCCTCATGTACTTTGCGTACTCCTCATTCACCGCT
CGGTAAGAAGGAGGGTTGTTGGGCCAGAAGCGGTAGTT
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