CN188156

Overview
NameCN188156
Unique NameCN188156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 53/181 (29.28%), Postives = 91/181 (50.28%), Query Frame = -1
Query:  190 WPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQ--VFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYS 726
            WP  P  YR V  +Y+  +R++  ++  Y                    I+ ML  NYYPPCP P   LG   H D + +T+L   ++PGLQ  + KD  WI  + IP A V+++G  +++++N K++  +HR      + R+S    + P     + P  +L++ +NPP YK   + +++
Sbjct:  147 WPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLGYFDNELS--QIQMMLT-NYYPPCPDPSSTLGSGGHYDGNLITLL-QQDLPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQDNPPLYKPYSYSEFA 323          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 50/118 (42.37%), Postives = 71/118 (60.17%), Query Frame = -1
Query:  217 MLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 570
            ++++NYYP C RP   LG   H D ++LT+L  + V GL+V+ + RW   +  P ALV+++GD    LSN +Y++ LHR  V+    R S   FL P  DTVV P  +LVDD +P  Y
Sbjct:  213 IMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQDHVGGLEVWAEGRWRAIRPRPGALVVNVGDTFMALSNARYRSCLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVY 330          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.682e-20
Identity = 61/167 (36.53%), Postives = 84/167 (50.30%), Query Frame = -1
Query:  217 YRAVNEEYAKYMREV----VDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKY 705
            +R + E YA+Y  E+    ++ +               +   G D I   +++NYYPPC RP   LG   H D ++LT+L  + V GLQV  + RW   +   +A V++IGD    LSNG+YK+ LHR  V+    R S   FL P  D VV P   LVD  NP  Y
Sbjct:  157 HRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSI---MRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDNVGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLVDAANPRAY 320          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.197e-20
Identity = 55/164 (33.54%), Postives = 85/164 (51.83%), Query Frame = -1
Query:  253 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPL 738
            +Y  WP  P  +R+  E Y++ +  +  KL              L +A    D+E  + INYYP CP+PDL LGV  HTD   +T+L+ + V GLQ  +D    WI  + +  A V+++GD    LSNG+++   H+  V+   +R+S   F  P  + +V PL
Sbjct:  143 DYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACV--DMEQKVLINYYPTCPQPDLTLGVRRHTDPGTITILLQDMVGGLQATRDGGKTWITVQPVEGAFVVNLGDHGHYLSNGRFRNADHQAVVNSTSSRLSIATFQNPAQNAIVYPL 304          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.860e-19
Identity = 46/102 (45.10%), Postives = 63/102 (61.76%), Query Frame = -1
Query:  262 LKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVV 567
            L++N YPPCP+P    G++ HTD   LT+L  ++V GLQ+ KD+RWI  K  P AL+I+IGD  +  SNG YK+V HR   +    R S   F+ P  D V+
Sbjct:  195 LRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQDQVGGLQLIKDNRWIAVKPNPKALIINIGDLFQAWSNGMYKSVEHRVMTNPKVERFSTAYFMCPSYDAVI 296          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.686e-18
Identity = 53/164 (32.32%), Postives = 84/164 (51.22%), Query Frame = -1
Query:  253 NYRFWPNNPPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKD--DRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPL 738
            +Y  WP  P  + AV E Y++ +  +   L              L +A    D++  + +N+YP CP+PDL LG+  HTD   +T+L+ + V GLQ  +D    WI  + I  A V+++GD    +SNG++K   H+  V+ + +R+S   F  P  D  V PL
Sbjct:  145 DYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACV--DMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQDLVGGLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWPL 306          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.065e-17
Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = -1
Query:  214 EYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTDLSALTVLVPNEVPGLQVFKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVS-KDKTRMSWPVF----LEPPADTVVGPLPQLVDDENPPKYK 687
            EY+K + ++ + +F             LKE      + +ML  + +PPCP P+   G   HTD S LT+L+ +   GLQV  D  WID    P AL+ ++GD ++++SN K+ ++ HR   +  ++ R+S   F       P+  V GP+ +L+ + NPPKY+
Sbjct:  173 EYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGL-WML-CHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNNGGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACFFVHTFTSPSSRVYGPIKELLSELNPPKYR 333          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 50/190 (26.32%), Postives = 89/190 (46.84%), Query Frame = -1
Query:  175 NPPSYRAVNEEYAKYMREVV-DKLFTYXXXXXXXXXXXLKEAAGGDDIEYMLKINYYPPCPRPDL-------ALGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLN 717
            +P ++R   EEY   +R++  D L              L +     + + +L++N+YPPCP  +         +G   HTD   ++VL  N   GLQ+   D  WI       +   ++GD +++++NG++K+V HR   +  K+R+S   F  P     + PL  L+D+E+   Y+   + +Y     N
Sbjct:  119 SPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNEDERLYEEFTWSEYKNSTYN 308          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.397e-13
Identity = 49/179 (27.37%), Postives = 84/179 (46.93%), Query Frame = -1
Query:  193 PPSYRAVNEEYAKYMREVVDKLFTYXXXXXXXXXXXLKEAAGGDD-IEYMLKINYYPPCPRPD---LALGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDY 714
            P  +R   EEY K ++EV  K+                     D+  +  L++N+YP         + +G   HTD   ++VL  N   GLQ+  KD  W+      ++  I++GD +++++NG++K+V HR      ++R+S   F  PP    + PLP LV +++   YK   +  Y
Sbjct:  134 PQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYFGGPPLSQKIAPLPCLVPEQDDWLYKEFTWSQY 312          
BLAST of CN188156 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.795e-13
Identity = 39/136 (28.68%), Postives = 70/136 (51.47%), Query Frame = -1
Query:  172 KINYYPPCPRPDLA----LGVVAHTDLSALTVLVPNEVPGLQV-FKDDRWIDAKYIPNALVIHIGDQIEILSNGKYKAVLHRTTVSKDKTRMSWPVFLEPPADTVVGPLPQLVDDENPPKYKAKKFKDYSYCKLNK 564
            ++N+YPPCP         +G   HTD   ++VL  N   GLQ+   D  W+       +  I++GD +++++NG++K+V HR      K+R+S   F  P     + PLP ++      K +   +K++++C+  K
Sbjct:  181 RLNHYPPCPEVQALNRNLVGFGEHTDPQIISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVM-----LKGEECLYKEFTWCEYKK 311          
The following BLAST results are available for this feature:
BLAST of CN188156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
HY6H_HYONI1.682e-2029.28Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
GAOX1_ORYSJ1.682e-2042.37Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
GAO1D_WHEAT1.682e-2036.53Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
FNSI_PETCR2.197e-2033.54Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
G2OX8_ARATH1.860e-1945.10Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
FL3H_HORVU2.686e-1832.32Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
GSL_ARATH5.065e-1732.52Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX1_ARATH3.630e-1526.32Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX2_ARATH3.397e-1327.37Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis th... [more]
G2OX_PHACN5.795e-1328.68Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188156 ID=CN188156; Name=CN188156; organism=Citrus sinensis; type=EST; length=738bp
TTTTTTTTAACATTAAGGATTATTTATTATTGCTAATACCCGCGATTACA
TTTCAGAAACAAGATCGCAACAACAAACAAGAATCGATAAACGTACAGTG
ACGAGATAAAACATGAGCGGCCAGCGGATACTGGTGTTATTTTTCTCATA
ATGAAAAATCTACTGAGGAAGTTTGTTAAGTTTACAGTAACTGTAATCCT
TGAACTTCTTGGCCTTGTACTTTGGAGGATTTTCATCGTCAACCAGCTGA
GGAAGGGGACCCACCACCGTATCCGCAGGTGGCTCCAAGAAAACTGGCCA
CGACATTCTCGTCTTGTCCTTGCTAACAGTGGTTCTATGCAGCACAGCTT
TGTACTTGCCATTGCTCAGAATCTCGATCTGGTCCCCGATGTGGATGACG
AGAGCGTTGGGGATGTACTTGGCATCGATCCAACGGTCGTCCTTAAAGAC
TTGCAGACCAGGAACTTCATTGGGAACAAGAACGGTGAGGGCAGAAAGAT
CAGTGTGGGCCACCACTCCAAGAGCAAGATCAGGACGTGGGCATGGCGGA
TAATAATTAATCTTGAGCATGTACTCAATGTCGTCTCCTCCCGCTGCTTC
TTTCAAAACACCTCCTTCGACACCCAGTCCCAACGAAAGATACGTAAACA
ACTTATCCACCACCTCCCTCATGTACTTTGCGTACTCCTCATTCACCGCT
CGGTAAGAAGGAGGGTTGTTGGGCCAGAAGCGGTAGTT
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