CN188154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 49/146 (33.56%), Postives = 72/146 (49.32%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-----GFITAQSRKSSQETTGYVFLRCVI------TGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY H +Q+ ++C + G+VDFIFGN+ + ++C+++ + ITAQ R + TG C I + T YLGRPW + R V+ +Y+D + VGW W + + EY GPGS R TW Sbjct: 395 DTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTW 540
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = -2 Query: 220 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGY------VFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELL---DEEAEQFLMHNFI 678 DTLY+H +Q+ ++C I G+VDFIFGN+ ++++C I+ + + ITAQ+RK + TG V + G+ YLGRPW F R V+ +Y+ + GW W + + EY GPGS +R +W + EA +F + FI Sbjct: 413 DTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFI 579
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19 Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVEN-ERSACFY-EYRCFGPGSCPAKRETW 678 DTLY+H ++Q+ ++CYI G++DFIFGN+ + ++C I + ITAQ R + TG I + YLGRPW + RV TY+D I +GW W + N + FY EY+ FGPGS R W Sbjct: 409 DTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRW 556
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18 Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = -2 Query: 217 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFY-EYRCFGPGSCPAKRETWA--RELLDE-EAEQFLMHNFID 678 DTLY+H KQ+ ++C I G++DFIFGN+ + ++ ++ + TAQSR S + TG L C I + YLGRPW + R V +++D I GW GK + +Y EY GPG+ AKR TW R + ++ EA QF + FID Sbjct: 349 DTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLE-GKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFID 516
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18 Identity = 59/169 (34.91%), Postives = 79/169 (46.75%), Query Frame = -2 Query: 211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-----GFITAQSRKSSQETTGYVFLRCVITGN------GGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLDEEAEQFLMHNFIDPD 678 DTLY H +Q+ ++C I G++D+IFGN+ + + C+I K ITAQSR + E TG C I + YLGRPW F R V +Y+D+ I GW W E + + EY GPGS KR W + E+A F FI D Sbjct: 365 DTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIMGYEDAFNFTATEFITGD 533
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18 Identity = 52/166 (31.33%), Postives = 80/166 (48.19%), Query Frame = -2 Query: 220 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVI------TGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLDEEAEQFLMHNFI 678 DTLY H +Q+ ++C + G+VDFIFGN+ ++++C+++ + +TAQ R + TG C I + T YLGRPW + R V TY+D + GW+ W + + EY GPGS R TW + +A F + NF+ Sbjct: 376 DTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVINATDASNFTVTNFL 541
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = -2 Query: 157 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG----GTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFY-EYRCFGPGSCPAKRETWA--RELLD-EEAEQFLMHNFIDPDPQRPWLAQRMALRIPYSA 678 D LY H ++Q+ ++C+I G+VDFI GN+ A+ + C I + ITAQSR + +G+ C IT + T YLGRPW F V +++ + GW W K E S Y EY+ GPG+ ++R W+ + + D ++A +F + +D + WL + RIPY + Sbjct: 316 DALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPW-KGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGE---TWLKES---RIPYES 495
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 48/146 (32.88%), Postives = 68/146 (46.58%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY+H +Q+ C + G+VDFIFGN A+ + C IH + G +TAQ R + TG V +C I + YLGRPW + R V + + I+ GWH W + + EY G G+ + R W Sbjct: 400 DTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKW 545
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 48/146 (32.88%), Postives = 69/146 (47.26%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG------GTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY+H +Q+ C I G+VDFIFGN+ +++ C IH + + +TAQ R + TG V +C I G+ YLGRPW + + V + + IR GW W + + EY G G+ A R W Sbjct: 409 DTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKW 554
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = -2 Query: 157 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGG----TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLD-EEAEQFLMHNFIDPDPQRPWLAQRMALRIPYSA 678 D LY H ++Q+ ++C+I G+VDFI GN+ A+ + C I + ITAQSR +G+ +C IT + T YLGRPW F V +++ + GW W + + EY+ GPG+ ++R W+ + + D ++A +F + +D + WL + RIPY + Sbjct: 343 DALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTTTVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGE---TWLKE---TRIPYES 522 The following BLAST results are available for this feature:
BLAST of CN188154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188154 ID=CN188154; Name=CN188154; organism=Citrus sinensis; type=EST; length=679bpback to top |