CN188154

Overview
NameCN188154
Unique NameCN188154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8707 contig Csv1_Contig8707:233..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 49/146 (33.56%), Postives = 72/146 (49.32%), Query Frame = -2
Query:  274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-----GFITAQSRKSSQETTGYVFLRCVI------TGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678
            DTLY H  +Q+ ++C + G+VDFIFGN+  + ++C+++ +         ITAQ R    + TG     C I        +  T   YLGRPW  + R V+  +Y+D  +  VGW  W       +  + EY   GPGS    R TW
Sbjct:  395 DTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTW 540          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 54/167 (32.34%), Postives = 83/167 (49.70%), Query Frame = -2
Query:  220 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGY------VFLRCVITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELL---DEEAEQFLMHNFI 678
            DTLY+H  +Q+ ++C I G+VDFIFGN+  ++++C I+ +      +  ITAQ+RK   + TG       V     +    G+   YLGRPW  F R V+  +Y+   +   GW  W       +  + EY   GPGS   +R +W    +     EA +F +  FI
Sbjct:  413 DTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITAQNRKDPNQNTGISIHASRVLAASDLQATNGSTQTYLGRPWKLFSRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFI 579          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.935e-19
Identity = 53/148 (35.81%), Postives = 74/148 (50.00%), Query Frame = -2
Query:  274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVEN-ERSACFY-EYRCFGPGSCPAKRETW 678
            DTLY+H ++Q+ ++CYI G++DFIFGN+  + ++C I  +         ITAQ R    + TG       I        +      YLGRPW  + RV    TY+D  I  +GW  W +  N   +  FY EY+ FGPGS    R  W
Sbjct:  409 DTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMILVRRPLHGQANIITAQGRGDPFQNTGITIHSSRIIAASDLKPVIRAYKTYLGRPWQAYSRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRW 556          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.768e-18
Identity = 60/169 (35.50%), Postives = 86/169 (50.89%), Query Frame = -2
Query:  217 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFY-EYRCFGPGSCPAKRETWA--RELLDE-EAEQFLMHNFID 678
            DTLY+H  KQ+ ++C I G++DFIFGN+  + ++  ++ +          TAQSR  S + TG   L C I        +      YLGRPW  + R V   +++D  I   GW   GK +      +Y EY   GPG+  AKR TW   R + ++ EA QF +  FID
Sbjct:  349 DTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLE-GKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFID 516          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.938e-18
Identity = 59/169 (34.91%), Postives = 79/169 (46.75%), Query Frame = -2
Query:  211 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQ-----GFITAQSRKSSQETTGYVFLRCVITGN------GGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLDEEAEQFLMHNFIDPD 678
            DTLY H  +Q+ ++C I G++D+IFGN+  + + C+I  K         ITAQSR +  E TG     C I  +            YLGRPW  F R V   +Y+D+ I   GW  W   E   +  + EY   GPGS   KR  W     +  E+A  F    FI  D
Sbjct:  365 DTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIMGYEDAFNFTATEFITGD 533          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.143e-18
Identity = 52/166 (31.33%), Postives = 80/166 (48.19%), Query Frame = -2
Query:  220 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVI------TGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLDEEAEQFLMHNFI 678
            DTLY H  +Q+ ++C + G+VDFIFGN+  ++++C+++ +         +TAQ R    + TG     C I        +  T   YLGRPW  + R V   TY+D  +   GW+ W       +  + EY   GPGS    R TW     +   +A  F + NF+
Sbjct:  376 DTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVINATDASNFTVTNFL 541          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.773e-18
Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = -2
Query:  157 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG----GTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFY-EYRCFGPGSCPAKRETWA--RELLD-EEAEQFLMHNFIDPDPQRPWLAQRMALRIPYSA 678
            D LY H ++Q+ ++C+I G+VDFI GN+ A+ + C I  +         ITAQSR +    +G+    C IT +      T   YLGRPW  F  V    +++   +   GW  W K E   S   Y EY+  GPG+  ++R  W+  + + D ++A +F +   +D +    WL +    RIPY +
Sbjct:  316 DALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTATVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPW-KGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGE---TWLKES---RIPYES 495          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 48/146 (32.88%), Postives = 68/146 (46.58%), Query Frame = -2
Query:  274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678
            DTLY+H  +Q+   C + G+VDFIFGN  A+ + C IH +  G      +TAQ R    + TG V  +C I        +      YLGRPW  + R V   + +   I+  GWH W       +  + EY   G G+  + R  W
Sbjct:  400 DTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKW 545          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 48/146 (32.88%), Postives = 69/146 (47.26%), Query Frame = -2
Query:  274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNG------GTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678
            DTLY+H  +Q+   C I G+VDFIFGN+  +++ C IH +      +  +TAQ R    + TG V  +C I          G+   YLGRPW  + + V   + +   IR  GW  W       +  + EY   G G+  A R  W
Sbjct:  409 DTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKW 554          
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = -2
Query:  157 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGG----TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWA--RELLD-EEAEQFLMHNFIDPDPQRPWLAQRMALRIPYSA 678
            D LY H ++Q+ ++C+I G+VDFI GN+ A+ + C I  +         ITAQSR      +G+   +C IT +      T   YLGRPW  F  V    +++   +   GW  W       +  + EY+  GPG+  ++R  W+  + + D ++A +F +   +D +    WL +    RIPY +
Sbjct:  343 DALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTTTVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGE---TWLKE---TRIPYES 522          
The following BLAST results are available for this feature:
BLAST of CN188154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
PME7_ARATH7.935e-1933.56Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME34_ARATH7.935e-1932.34Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME33_ARATH7.935e-1935.81Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH1.768e-1835.50Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME12_ARATH3.938e-1834.91Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME20_ARATH5.143e-1831.33Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME30_ARATH8.773e-1832.09Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PMEU1_SOLLC1.146e-1732.88Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME3_ARATH1.146e-1732.88Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME19_ARATH1.146e-1730.11Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188154 ID=CN188154; Name=CN188154; organism=Citrus sinensis; type=EST; length=679bp
AGTGATTAATAGAATTGTTTTTTAATCACCCATAAAATTACTATAGTAAT
AAGCACACACCATCTTTCGTCATGACACAAGTACGATTTTATTGACCTCA
ATTTCGGTCTTATTTGCTGGGAACCTCATGCTTGTCTTATTCAATTGTGA
TCTTTAAGCAGAATATGGTATCCTCAGGGCCATTCTCTGGGCAAGCCAAG
GTCTTTGAGGATCTGGGTCGATGAAATTATGCATGAGAAACTGTTCTGCC
TCTTCATCTAACAGTTCTCTAGCCCAGGTTTCGCGTTTTGCTGGGCAGCT
ACCTGGTCCAAAACACCTATACTCATAAAAGCAAGCACTCCTCTCGTTCT
CCACTTTGCCCCAGTTATGCCAGCCTACATGTCTGATACATTGATCCATA
TATGTAAATGCAAAGACCACCCTTCCGAAAGGTCCCCATGGGCGTCCAAG
ATAGATATATCCTGTCCCTCCATTCCCAGTGATCACACATCTCAAAAACA
CATAACCAGTTGTCTCCTGAGAGGATTTCCTGCTTTGTGCAGTAATAAAA
CCTTGCGACTTGCAGTGGATATGACAATGCTCTATGAGAGCAGTACTATT
CCCAAATATAAAATCCACACTTCCTTCAATATAGCAATCTTTCAGATACT
GTTTTTCATAATGCAAGTAAAGAGTATCC
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