CN188154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKSQG-----FITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 D+LY+H +Q+ +C+I G+VDFIFGN+ +++ C IH + G +TAQ R + TG V + I + YLGRPW + R V + + I GW W + + EY+ G G+ + R TW Sbjct: 136 DSLYVHSNRQFFINCFIAGTVDFIFGNAAVVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVQSSFPTYLGRPWKEYSRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTW 281
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.814e-16 Identity = 47/146 (32.19%), Postives = 71/146 (48.63%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHI-----HCKSQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY H ++Q+ +D Y+ G+VDFIFGN+ + + C I + + + +TAQ R + TG C I + + YLGRPW R V +Y+D I GW W ++ + E+ GPG+ +KR W Sbjct: 359 DTLYAHSQRQFYRDSYVTGTVDFIFGNAAVVFQKCQIVARKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKW 504
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 49/146 (33.56%), Postives = 73/146 (50.00%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCV------ITGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 D LY+H +Q+ ++C I G+VDFIFGN+ +++ C+I+ + + ITAQ+RK + TG C + + G+ YLGRPW + RVV+ + M I GW W S + EY G GS +R W Sbjct: 402 DALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKW 547
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.212e-16 Identity = 45/146 (30.82%), Postives = 70/146 (47.95%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY H ++Q+ +D Y+ G++DFIFGN+ + + C + + Q +TAQ R + TG C I + + YLGRPW + R V +Y+ I GW W ++ + E+ GPG+ +KR W Sbjct: 365 DTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKW 510
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 49/148 (33.11%), Postives = 71/148 (47.97%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHC----HIHCKSQ-GFITAQSRKSSQETTGYVFLRCVITGNGGTGYI------YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNW--GKVENERSACFYEYRCFGPGSCPAKRETW 678 DTL +H ++Q+ ++CYI G+VDFIFGN+ + ++C + K Q ITAQ R + TG +I + Y+GRPW + R V TY+D + VGW W G + + EY+ GP S R W Sbjct: 355 DTLMVHSQRQFYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRW 502
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 51/168 (30.36%), Postives = 79/168 (47.02%), Query Frame = -2 Query: 214 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS-----QGFITAQ-SRKSSQETTGYVFLRCVITGNGG------TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLD-EEAEQFLMHNFIDP 678 DTLY++ +Q+ ++ + G+VDFIFG S +I++ I C+ +TA + K G V C I + T YLGRPW PF T + I+ GW+ W + +A + E+ GPG+ A R WA+ E E+F + N++ P Sbjct: 402 DTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWAKMAKSAAEVERFTVANWLTP 569
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.549e-14 Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = -2 Query: 214 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS-----QGFITAQSRKSSQETT-GYVFLRCVITGNGG------TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLD-EEAEQFLMHNFIDP 678 DTLY++ +Q+ ++ + G+VDFI G S +I++ I C+ +TA ++ + G V C I + T YLGRPW PF T + I+ GW+ W + +A + E+ GPG+ PA R WA+ E E+F + N++ P Sbjct: 389 DTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWAKMAKSAAEVERFTVANWLTP 556
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.450e-14 Identity = 42/145 (28.97%), Postives = 68/145 (46.90%), Query Frame = -2 Query: 274 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK-----SQGFITAQSRKSSQETTGYVFLRCVITGNGGTGYI-----YLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETW 678 DTLY+ ++Q+ +DC I G++DF+FG + ++C + C+ Q +TA R+ + VF TG + YLGRPW + +VV + +D G+ W + + +YEY GPG+ R W Sbjct: 259 DTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKVSYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKW 403
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.885e-14 Identity = 54/174 (31.03%), Postives = 79/174 (45.40%), Query Frame = -2 Query: 199 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK----SQG-FITAQSRKSSQETTGYVFLRCVITGN------GGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELL---DEEAEQFLMHNFIDPDPQRP 678 DTL+ H +Q+ +D +I G++DFIFG++ A+ ++C I + QG ITAQ R +G I G YLGRPW + R VF T +D+ I GW W + + E+ G G+ +R W + +EEA F + FI D P Sbjct: 336 DTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRFKSYLGRPWKKYSRTVFLKTDIDELIDPRGWREWSGSYALSTLYYGEFMNTGAGAGTGRRVNWPGFHVLRGEEEASPFTVSRFIQGDSWIP 509
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_ASPTU (Pectinesterase OS=Aspergillus tubingensis GN=pme1 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.004e-13 Identity = 52/150 (34.67%), Postives = 67/150 (44.67%), Query Frame = -2 Query: 256 DTLYLHYEKQYLKDCYIEGSVDFIFG-NSTALIEHCHIHC---KSQGFITAQSRKSSQETTGYVFLRCVITGNGG----TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWG-KVENERSACFYEYRCFGPGSCPAKRETWARELLD 678 DTL Q YIEG+VDFIFG ++ A C I S ITA R S + + YV + + G +G YLGRPW + RV F T M I H+GW W N + F EY G G+ R ++ EL + Sbjct: 161 DTLLAETGYQVYAGTYIEGAVDFIFGQHARAWFHECDIRVLEGPSSASITANGRSSESDDSYYVIHKSTVAAADGNDVSSGTYYLGRPWSQYARVCFQKTSMTDVINHLGWTEWSTSTPNTENVTFVEYGNTGTGA-EGPRANFSSELTE 309 The following BLAST results are available for this feature:
BLAST of CN188154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188154 ID=CN188154; Name=CN188154; organism=Citrus sinensis; type=EST; length=679bpback to top |