CN188154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.311e-13 Identity = 48/168 (28.57%), Postives = 79/168 (47.02%), Query Frame = -2 Query: 214 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCKS-----QGFITAQ-SRKSSQETTGYVFLRCVITGNGG------TGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLD-EEAEQFLMHNFIDP 678 DTLY++ +Q+ ++ + G+VDFIFG S +I++ I + ++TA + K + G V C I + T YLGRPW F V T + I+ GW W +N ++A + E+ GPG+ +R W + E E + + N++ P Sbjct: 406 DTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPWVKVAKSAAEVETYTVANWVGP 573
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.814e-13 Identity = 52/168 (30.95%), Postives = 75/168 (44.64%), Query Frame = -2 Query: 214 DTLYLHYEKQYLKDCYIEGSVDFIFGNSTALIEHCHIHCK--SQGFITAQSRKSSQ----ETTGYVFLRCVI------TGNGGTGYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWGKVENERSACFYEYRCFGPGSCPAKRETWARELLD-EEAEQFLMHNFIDP 678 DTLY++ +Q+ ++C + G+VDFIFG S +I++ I + S+G + ++ G V C I T T YLGRPW F V T M IR GW W +S + EY GPG+ +R WA+ E F N++ P Sbjct: 406 DTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWAKVARSAAEVNGFTAANWLGP 573
BLAST of CN188154 vs. ExPASy Swiss-Prot
Match: PME_ASPAC (Pectinesterase OS=Aspergillus aculeatus GN=pme1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.110e-12 Identity = 52/148 (35.14%), Postives = 68/148 (45.95%), Query Frame = -2 Query: 262 DTLYLHYEKQYLKDCYIEGSVDFIFG-NSTALIEHCHIHC---KSQGFITAQSRKSSQETTGYVFLRCVITGNGGT----GYIYLGRPWGPFGRVVFAFTYMDQCIRHVGWHNWG-KVENERSACFYEYRCFGPGSCPAKRETWAREL 678 DTL Q + YIEG+VDFIFG ++ A ++ I + ITA R S +T+ YV + + G G YLGRPW + RVVF T M I +GW W N F EY G GS R ++A +L Sbjct: 162 DTLLAQTGNQLYINSYIEGAVDFIFGQHARAWFQNVDIRVVEGPTSASITANGRSSETDTSYYVINKSTVAAKEGDDVAEGTYYLGRPWSEYARVVFQQTSMTNVINSLGWTEWSTSTPNTEYVTFGEYANTGAGS-EGTRASFAEKL 308 The following BLAST results are available for this feature:
BLAST of CN188154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188154 ID=CN188154; Name=CN188154; organism=Citrus sinensis; type=EST; length=679bpback to top |