CN188150

Overview
NameCN188150
Unique NameCN188150
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length655
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YPL1_DROME (Protein yippee-like CG15309 OS=Drosophila melanogaster GN=CG15309 PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.464e-24
Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = -1
Query:  206 ASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLKA-GW 466
            AS D ++SK+FQG  G AYLF SVVNV+ G  EER+L++GLH+V DIYC  C+  LGW+YE AYE SQKYKEG +I+E   M+K  GW
Sbjct:   26 ASHDELISKSFQGSQGPAYLFNSVVNVACGQTEERVLLTGLHAVADIYCECCKTPLGWKYEHAYESSQKYKEGKFIIELAHMIKENGW 113          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 5.909e-24
Identity = 48/84 (57.14%), Postives = 65/84 (77.38%), Query Frame = -1
Query:  206 DHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLKAGW 457
            D I+SKAFQGR GRA+LF   +N+ +GP+E+R L++GLH+V DI C  C + LGW+YE+AYE SQKYKEG +I EK +++K  W
Sbjct:   23 DDIISKAFQGRTGRAFLFSHAMNIVVGPKEDRNLLTGLHTVADISCVDCNEPLGWKYERAYETSQKYKEGKFIFEKAKIVKEDW 106          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YPL1_CAEEL (Protein yippee-like F37A8.5 OS=Caenorhabditis elegans GN=F37A8.5 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.933e-23
Identity = 50/88 (56.82%), Postives = 66/88 (75.00%), Query Frame = -1
Query:  206 ASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK-AGW 466
            A+   ++SK+FQG  G+AYLF +VVNV  GP EER+L++GLH+V DIYC  C+  LGW+YE A+E SQKYKEG +I+E   M+K  GW
Sbjct:   44 AAHAELISKSFQGSQGKAYLFNAVVNVGCGPAEERVLLTGLHAVADIYCEICKTTLGWKYEHAFESSQKYKEGKFIIELAHMVKDNGW 131          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL7_ARATH (Protein yippee-like At5g53940 OS=Arabidopsis thaliana GN=At5g53940 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.242e-22
Identity = 45/83 (54.22%), Postives = 66/83 (79.52%), Query Frame = -1
Query:  218 ASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERML 466
            A PD +VS++F  R G+AYLF   VN+S+GP EERL++SG+H+V DI+C  C Q +GW+YE A+E++QKYKEG ++LE+ R++
Sbjct:   24 ALPDDLVSRSFHCRRGKAYLFNRSVNISMGPLEERLMLSGMHTVADIFCCCCGQNVGWKYESAHEKAQKYKEGKFVLERGRIV 106          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL1_ARATH (Protein yippee-like At3g08990 OS=Arabidopsis thaliana GN=At3g08990 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.043e-20
Identity = 44/83 (53.01%), Postives = 66/83 (79.52%), Query Frame = -1
Query:  218 ASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERML 466
            A  + I+SK+F  + GRAYLF +VVNV++G +E R++++G H+V DI+C SC  L+GW+YE AY++SQKYKEG +ILE+ ++L
Sbjct:   24 AVTNDIISKSFHCKHGRAYLFDNVVNVTVGEKEHRVMITGWHTVADIFCVSCGSLVGWKYEIAYDKSQKYKEGKFILERFKVL 106          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL3_ARATH (Protein yippee-like At3g11230 OS=Arabidopsis thaliana GN=At3g11230 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.761e-20
Identity = 41/79 (51.90%), Postives = 61/79 (77.22%), Query Frame = -1
Query:  221 DHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERM 457
            D +VSK+FQ R G+AYLF  VVNV  G +E+R++++G+H+V DIYC  C   +GW+YE A+E++QKYKEG  +LE+ ++
Sbjct:   27 DDVVSKSFQSRHGKAYLFSKVVNVYAGKKEDRMMMTGMHTVVDIYCVKCGSYVGWKYEFAFEKNQKYKEGKSVLERYKV 105          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL4_ARATH (Protein yippee-like At3g55890 OS=Arabidopsis thaliana GN=At3g55890 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.569e-19
Identity = 42/73 (57.53%), Postives = 60/73 (82.19%), Query Frame = -1
Query:  233 IVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILE 451
            I+SK+FQ + GRAYLF +VVNVS+G +E+R++++GLH+V DI+C  C   +GW+YE A+E+SQKYKEG  +LE
Sbjct:   29 IMSKSFQCKNGRAYLFNNVVNVSVGEKEDRMMITGLHNVVDIFCVGCGSNVGWKYEFAHEKSQKYKEGKSVLE 101          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL_SOLTU (Protein yippee-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18
Identity = 40/79 (50.63%), Postives = 60/79 (75.95%), Query Frame = -1
Query:  230 ASPDHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEK 466
            A  ++IVSK+F  + G+AYLF  VVNV+ G  E R++++G+H+V DI+C  C  ++GW+YE A+E+SQKYKEG  +LE+
Sbjct:   24 ALSENIVSKSFHCKHGKAYLFSKVVNVTSGEIENRMMMTGMHTVADIFCVCCGSIVGWKYETAHEKSQKYKEGKSVLER 102          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPP_DROME (Protein yippee OS=Drosophila melanogaster GN=Yippee PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.251e-15
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = -1
Query:  233 IVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILE 451
            ++S  F G  GRAYLF+ VVN++    +ER++++G H V D+ C +C   LGW YE A EESQKYKEG  ILE
Sbjct:   30 LISTRFTGATGRAYLFKRVVNLTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKYKEGRVILE 102          
BLAST of CN188150 vs. ExPASy Swiss-Prot
Match: YIPL5_ARATH (Protein yippee-like At4g27740 OS=Arabidopsis thaliana GN=At4g27740 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.488e-14
Identity = 32/81 (39.51%), Postives = 55/81 (67.90%), Query Frame = -1
Query:  215 DHIVSKAFQGRFGRAYLFRSVVNVSLGPREERLLVSGLHSVNDIYCSSCQQLLGWRYEKAYEESQKYKEGMYILEKERMLK 457
            + ++SK F G  G A++F   +NV +GP+  R L++G + V D+ CS C + LGW+Y + ++  Q+YKEGM+++EK ++ K
Sbjct:   23 EDLISKKFVGASGPAFMFSHAMNVVVGPKIGRKLITGSYVVADVMCSKCGETLGWKYVETFDLKQRYKEGMFVIEKLKLTK 103          
The following BLAST results are available for this feature:
BLAST of CN188150 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
YPL1_DROME3.464e-2460.23Protein yippee-like CG15309 OS=Drosophila melanoga... [more]
YIPL6_ARATH5.909e-2457.14Protein yippee-like At4g27745 OS=Arabidopsis thali... [more]
YPL1_CAEEL2.933e-2356.82Protein yippee-like F37A8.5 OS=Caenorhabditis eleg... [more]
YIPL7_ARATH3.242e-2254.22Protein yippee-like At5g53940 OS=Arabidopsis thali... [more]
YIPL1_ARATH1.043e-2053.01Protein yippee-like At3g08990 OS=Arabidopsis thali... [more]
YIPL3_ARATH6.761e-2051.90Protein yippee-like At3g11230 OS=Arabidopsis thali... [more]
YIPL4_ARATH2.569e-1957.53Protein yippee-like At3g55890 OS=Arabidopsis thali... [more]
YIPL_SOLTU2.840e-1850.63Protein yippee-like OS=Solanum tuberosum PE=2 SV=1[more]
YIPP_DROME2.251e-1552.05Protein yippee OS=Drosophila melanogaster GN=Yippe... [more]
YIPL5_ARATH2.488e-1439.51Protein yippee-like At4g27740 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188150 ID=CN188150; Name=CN188150; organism=Citrus sinensis; type=EST; length=655bp
TTTTTTTTTTTTTTTTTAATCTAAAGTTATTTTCATTAAATCAAACCTTT
TGCAGCTGCGAACATGCCAGCCTACAATGTCTACTAACACGATGAGATCA
GATCAATTCTTTCTTTCTTTCCTTAAAAGAGAGAAAAAATGTTCAGCTAC
AAAAAGATTGGCTTCTTCCAATATGTTTTATATGTATCCATATAACATGA
CATCACCAACCTGCCTTCAGCATTCGTTCCTTTTCCAGAATGTACATCCC
TTCTTTATACTTCTGGCTCTCTTCATATGCCTTCTCATATCTCCAGCCGA
GTAACTGCTGACAGGAGCTGCAATAAATGTCATTCACGGAATGCAACCCA
CTGACAAGAAGCCGCTCTTCTCTAGGCCCAAGAGACACATTTACCACAGA
TCGGAAAAGATAAGCACGGCCAAAACGGCCTTGAAAAGCCTTGGAAACGA
TGTGATCGGGAGATGCCGAGTCGACTTTGCAACTCTTGCACTTGAAGATC
CTTTTTTTTTTTTTTTTTTTTTTGAACCAACCGAAGTGTATCACTCCAAT
TGCATATGAAAAAGAAGTCCCTTTCATTTGATTCGAACAAAATTACAACA
CCATGTAAACTTTATTTTGCTATTACATGAGGAAATTATCAAGAGGCTGA
GTAAC
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