CN188149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_EIMTE (Elongation factor Tu, apicoplast OS=Eimeria tenella GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 70/211 (33.18%), Postives = 100/211 (47.39%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYK 713 K KTH+NI IGHVD GK+T T + L I+ + + + +D E+ RGITI+ + ++ET + ID PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV +I NK+D + + EV L YN + + S + IE++ N W K Sbjct: 8 KTKTHLNIGTIGHVDHGKTTLTAAITSYLSKINNTKAKSYSE---------------IDSAPEEKARGITINTSHIEYETNLRHYAHIDCPGHADYIKNMITGAAQMDGAILVVSATDGPMP-------QTREHLLLAKQVGVPNIIVFLNKIDMVE---DNELLELVELEVRELLDIYEYNGDSTSIIKGSALKALEYIEKNDLNNKWVK 193
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 65/188 (34.57%), Postives = 96/188 (51.06%), Query Frame = 3 Query: 90 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 650 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET + + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK D + A E+V+ EV L K + +++PFV Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED----QIDDADLLELVELEVRELLSKYDFPGDQIPFV 171
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_CYAP4 (Elongation factor Tu OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=tuf PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 59/193 (30.57%), Postives = 98/193 (50.78%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG 662 + K H+NI IGHVD GK+T T + L + + ++++ +D E+ RGITI+ A ++ETT+ + +D PGH D++KNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK+D + + + E+ L ++ + +P + SG Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAAARKYDE---------------IDAAPEEKARGITINTAHVEYETTQRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGAMP-------QTKEHILLAKQVGVPSIVVFLNKVDQLD---DEELLELVELELRELLTSYDFDGDNIPIIRGSG 175
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 65/190 (34.21%), Postives = 97/190 (51.05%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 650 + K HINI IGHVD GK+T T + L ID V +++F++ +D E+ RGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + EV L K + E+VPFV Sbjct: 8 RSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDE---------------IDAAPEEKARGITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPSIVVFLNKADMID---DEELLELVELEVRELLSKYDFPGEEVPFV 172
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_CLOTE (Elongation factor Tu OS=Clostridium tetani GN=tufA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 68/190 (35.79%), Postives = 99/190 (52.11%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 650 + K H+NI IGHVD GK+T T + LG + F K +FKY + DK E+ERGITI + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + A E+V+ EV + + G+ + P V Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTILGH------KGFAK--------AFKYDEI-DKAPEEKERGITISTSHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEHIVVFLNKAD----QVDDAELIELVEMEVRELMNEYGFPGDDAPVV 171
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_ANASP (Elongation factor Tu OS=Anabaena sp. (strain PCC 7120) GN=tuf PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFE 668 + K H+NI IGHVD GK+T T + L + + V + +++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV +++ NK D A E+V+ E+ L + ++ + +P V SG + Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITMTLAALGQAVAKGYDQ---------------IDNAPEEKARGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVGVPKLVVFLNKED----MMEDAELLELVELELRELLTEYEFDGDDIPIVRGSGLQ 177
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU3_STRRA (Elongation factor Tu-3 OS=Streptomyces ramocissimus GN=tuf3 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.338e-21 Identity = 72/201 (35.82%), Postives = 101/201 (50.25%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET-TRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 674 + K H+NI +GHVD GK+T T + K AE +F +D+ E RGITI+IA ++ET TR+Y V D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L + GY + P V +SG EGD Sbjct: 8 RTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHV-DMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRDLLSEHGYGGDGAPVVRVSGLKALEGD 181
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 57/189 (30.16%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 650 + K H+N+ IGHVD GK+T T + L + + +R+++ +D ER RGITI+ A +++T + + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + E+ L K + +++P + Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITMTLAALGQATAKRYDE---------------IDAAPEERARGITINTAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKVDMVD---DEELLELVELEIRELLSKYDFPGDEIPII 171
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_PROA2 (Elongation factor Tu OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=tuf PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 64/175 (36.57%), Postives = 88/175 (50.29%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSY 608 +EK H+NI IGHVD GK+T T + L + F +DK ERERGITI A ++ET + + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + E+ + +S Y Sbjct: 8 REKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGMAQLREFGD---------------IDKAPEERERGITISTAHVEYETDKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPALVVFLNKVDIADPELIELVELELRELLSEY 160
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.360e-21 Identity = 72/201 (35.82%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 674 + K H+NI IGHVD GK+T T I K + ++F ++N+ R+F +D ER+RGITI+I+ +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E+ P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGD 183 The following BLAST results are available for this feature:
BLAST of CN188149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188149 ID=CN188149; Name=CN188149; organism=Citrus sinensis; type=EST; length=734bpback to top |