CN188149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_SULNB (Elongation factor Tu OS=Sulfurovum sp. (strain NBC37-1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 65/208 (31.25%), Postives = 97/208 (46.63%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW 707 + K HINI IGHVD GK+T T + L + ++ +D ERERGITI + ++ET + +D PGH D++KNMITG +Q D A+L+I +T G QTREH LL+ +GV ++ NK D + + + + EV L + + + P V S F+ + T +W Sbjct: 8 RTKPHINIGTIGHVDHGKTTLTAAITAVLAVAGDTELMDYD---------------AIDNAPEERERGITIATSHVEYETATRHYAHVDCPGHADYVKNMITGAAQMDGAILVIAATDGPM-------AQTREHILLSKQVGVPYIVVFLNKEDQLDDEDKEEMLELVEMEVRELLSEYDFPGDDTPIVAGSAFQALEEAKTGTLGEW 193
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_RICBR (Elongation factor Tu OS=Rickettsia bellii (strain RML369-C) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 650 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_RICB8 (Elongation factor Tu OS=Rickettsia bellii (strain OSU 85-389) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 61/190 (32.11%), Postives = 98/190 (51.58%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 650 + K H+NI IGHVD GK++ T + LG +K + ++++++ +D E+ERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV +M+ NK+D + + EV L K + +++P + Sbjct: 8 RTKPHVNIGTIGHVDHGKTSLTAAITMVLGKDNKDIKVKKYDE---------------IDAAPEEKERGITISTAHVEYETKSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPKMVVFLNKVDMVD---DPDLLELVEMEVRELLSKYDFPGDEIPII 172
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_PROMP (Elongation factor Tu OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 66/204 (32.35%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIE 686 + K H+NI IGHVD GK+T T I + ++ + +A + +D ERERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P V +SG EGD+ E Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTA-------AITNVLAKKGQAQAQDYGD--------IDGAPEERERGITINTAHVEYETAERHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLDSYDFPGDDIPIVQVSGLKALEGDSTWE 186
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCUA (Elongation factor Tu OS=Mycobacterium ulcerans (strain Agy99) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTU (Elongation factor Tu OS=Mycobacterium tuberculosis GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCTA (Elongation factor Tu OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCMM (Elongation factor Tu OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + +++ E+N+ R+F +D ER+RGITI+I+ +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----ELNESRAFDQ---IDNAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDA 142
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBT (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142
BLAST of CN188149 vs. ExPASy Swiss-Prot
Match: EFTU_MYCBP (Elongation factor Tu OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.713e-21 Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 3 Query: 84 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 548 + K H+NI IGHVD GK+T T I K + ++F ++N+ K +D ER+RGITI+IA +++T + + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNET--KAFDQIDNAPEERQRGITINIAHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADA 142 The following BLAST results are available for this feature:
BLAST of CN188149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188149 ID=CN188149; Name=CN188149; organism=Citrus sinensis; type=EST; length=734bpback to top |