CN188147

Overview
NameCN188147
Unique NameCN188147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR12_MACFA (Solute carrier family 2, facilitated glucose transporter member 12 OS=Macaca fascicularis GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.314e-12
Identity = 52/194 (26.80%), Postives = 91/194 (46.91%), Query Frame = 1
Query:   85 GLAITSEGGRYYNGKMT--------VFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            G A+ +EG    +G           +F  LS + AA  GL+ GY++GI  G                  ++  T ++  C     ++    SSL I  L+ASL    +   +GR+ +I++       GS +   +L+  +LI GR+ +GV I  ++ +  +Y++E+AP   RG      ++ + IG+LSA + N
Sbjct:   17 GTAVETEGSYRASGSRHPPWARGCGMFTFLSSVTAAVSGLLVGYELGIISGAL----------------LQIKTLLTLSCHEQEMVV----SSLLIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISN 190          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: INT2_ARATH (Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 47/157 (29.94%), Postives = 74/157 (47.13%), Query Frame = 1
Query:  139 FVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAF--TIGFQV 603
            +V+     A  GGL+FGYD G+  G      +++  F  V R              ++ L     S      ++ +          GR+++IL+    FL G+ I  AA N  +L+ GRV +G+G+G  + + PLY+SE +P K RGA   T GF +
Sbjct:   27 YVLRLAFSAGIGGLLFGYDTGVISGALL---YIRDDFKSVDR--------------NTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLGAIIMAAAPNPSLLVVGRVFVGLGVGMASMTAPLYISEASPAKIRGALVSTNGFLI 166          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR4_RAT (Solute carrier family 2, facilitated glucose transporter member 4 OS=Rattus norvegicus GN=Slc2a4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 52/186 (27.96%), Postives = 94/186 (50.54%), Query Frame = 1
Query:   94 ITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLY-ISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGG---AALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLL 639
            I SE G     ++T  +VL+   A  G L FGY+IG+   + + +  +++ +   +   +      +  +     L A + +++ + G+I+S     +++  GRK ++L      + G A+ G   AA +  +LI GR L+G   G T+  VP+Y+ E+AP   RGA     Q+ + IG+L A +L
Sbjct:    8 IGSEDGEPPQQRVTGTLVLAVFSAVLGSLQFGYNIGV---INAPQKVIEQSYNATWLGRQGPGGPDSIPQGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLANNVLAVLGGALMGLANAAASYEILILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVIGILVAQVL 190          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR12_HUMAN (Solute carrier family 2, facilitated glucose transporter member 12 OS=Homo sapiens GN=SLC2A12 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.241e-12
Identity = 47/169 (27.81%), Postives = 83/169 (49.11%), Query Frame = 1
Query:  136 VFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            +F  LS + AA  GL+ GY++GI  G                  ++  T ++  C     ++    SSL I  L+ASL    +   +GR+ +I++       GS +   +L+  +LI GR+ +GV I  ++ +  +Y++E+AP   RG      ++ + IG+LSA + N
Sbjct:   38 MFTFLSSVTAAVSGLLVGYELGIISGAL----------------LQIKTLLALSCHEQEMVV----SSLVIGALLASLTGGVLIDRYGRRTAIILSSCLLGLGSLVLILSLSYTVLIVGRIAIGVSISLSSIATCVYIAEIAPQHRRGLLVSLNELMIVIGILSAYISN 186          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: SNF3_YEAST (High-affinity glucose transporter SNF3 OS=Saccharomyces cerevisiae GN=SNF3 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 47/163 (28.83%), Postives = 78/163 (47.85%), Query Frame = 1
Query:  157 IVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGT-AFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            +  A GG +FGYD G+   +TSM        P             N+  F +Q ++   S L +     +L A  ++ ++GRK +I+      F  G+++   A  I +LI GRV+ G+GIG  +  VPLY +E      RGA    +Q  +  G+L ++ ++
Sbjct:  102 VFVAVGGFLFGYDTGLINSITSMNYVKSHVAP-------------NHDSFTAQQMSILVSFLSLGTFFGALTAPFISDSYGRKPTIIFSTIFIFSIGNSLQVGAGGITLLIVGRVISGIGIGAISAVVPLYQAEATHKSLRGAIISTYQWAITWGLLVSSAVS 251          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 47/159 (29.56%), Postives = 78/159 (49.06%), Query Frame = 1
Query:  118 YNGKMTVFVVLSCIVAATGGLIFGYDIG-ISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTI 591
            +N  ++ F++    VA+  G +FGYD G IS  + S+   L             D K+  Y   + +L+ A TS   +  LI S+ A T    FGR+  ++     FL G+ +   A   + +  GR+++G G+G  +   PL++SE+AP   RG  T+
Sbjct:  101 FNQSISPFIITLTFVASISGFMFGYDTGYISSALISINRDL-------------DNKVLTYG--EKELITAATS---LGALITSVGAGTAADVFGRRPCLMFSNLMFLIGAILQITAHKFWQMAAGRLIMGFGVGIGSLISPLFISEIAPKMIRGRLTV 241          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.927e-12
Identity = 52/173 (30.06%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKAS-ILVGGTAFLAGSAIGGAAL--NIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            K+T  +V +  VA  G   FGY+ G+   + + E  +K F      +  ED            L  A  S   + G+I S         FGR+ S +LV   A L G  +G A +  ++ MLI GR+++G+  G     VP+Y+ E++P   RGAF    Q+ + +G+L A +
Sbjct:    5 KVTPSLVFAVTVATIGSFQFGYNTGV---INAPETIIKDFLNYTLEERLEDLPREGLLTTLWSLCVAIFS---VGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQV 171          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.823e-12
Identity = 49/173 (28.32%), Postives = 82/173 (47.40%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGG---AALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            K+TV ++ +  +A  G   FGY+ G+   + + E  +K F      +  E+            L  A  S   + G+I S         FGR+ S+L+     +AG  + G    A ++ MLI GR+++G+  G     VP+Y+ E++P   RGAF    Q+ + IG+L A +
Sbjct:    5 KVTVSLIFALSIATIGSFQFGYNTGV---INAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFS---VGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQI 171          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.993e-12
Identity = 46/173 (26.59%), Postives = 79/173 (45.66%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            G  + +     I+A+   +I GYDIG+  G +                +K+D K+S+        L      L I  L+ S  A   +   GR+ +I++ G  F  G+ + G A N   ++ GR + G+G+G+     P+Y +E+AP   RG  T   ++ + IG+L   + N
Sbjct:   20 GNRSRYAFACAILASMTSIILGYDIGVMSGASIF--------------IKDDLKLSDV------QLEILMGILNIYSLVGSGAAGRTSDWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGFLTSFPEIFINIGILLGYVSN 172          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: PLT5_ARATH (Polyol transporter 5 OS=Arabidopsis thaliana GN=PLT5 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 46/172 (26.74%), Postives = 79/172 (45.93%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            K   +     I+A+   ++ GYDIG+  G              +Y  +K D KI++        +     SL I  LI S  A   +   GR+ +I++ G  F AG+ + G + N   L+FGR + G+G+G+     P+Y +E++P   RG      +V +  G++   + N
Sbjct:   31 KRNNYAFACAILASMTSILLGYDIGVMSGAM------------IY--IKRDLKINDL------QIGILAGSLNIYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAPVYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSN 182          
The following BLAST results are available for this feature:
BLAST of CN188147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GTR12_MACFA1.314e-1226.80Solute carrier family 2, facilitated glucose trans... [more]
INT2_ARATH2.241e-1229.94Probable inositol transporter 2 OS=Arabidopsis tha... [more]
GTR4_RAT2.241e-1227.96Solute carrier family 2, facilitated glucose trans... [more]
GTR12_HUMAN2.241e-1227.81Solute carrier family 2, facilitated glucose trans... [more]
SNF3_YEAST2.927e-1228.83High-affinity glucose transporter SNF3 OS=Saccharo... [more]
ITR2_YEAST2.927e-1229.56Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
GTR3_RAT2.927e-1230.06Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA3.823e-1228.32Solute carrier family 2, facilitated glucose trans... [more]
PLT1_ARATH4.993e-1226.59Putative polyol transporter 1 OS=Arabidopsis thali... [more]
PLT5_ARATH6.521e-1226.74Polyol transporter 5 OS=Arabidopsis thaliana GN=PL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188147 ID=CN188147; Name=CN188147; organism=Citrus sinensis; type=EST; length=643bp
ATTTTAACTTTTCTCACTCTCCTTTCTCTCTTGCTGTGACTGCTGATTAG
TTTTGAAGATAAAGCAGCAGCCAATATGGCAGCAGGCTTAGCAATAACTA
GTGAAGGCGGGCGGTATTACAACGGGAAGATGACTGTATTTGTTGTCTTG
TCTTGTATTGTTGCTGCCACCGGTGGGCTTATATTCGGCTATGATATTGG
AATTTCAGGTGGAGTGACATCAATGGAGCCATTTTTGAAGAAGTTTTTCC
CGGAAGTGTACAGAAAGATGAAAGAAGACACCAAGATAAGCAATTATTGC
AAGTTTGACAGCCAATTATTAGCCGCGTTCACGTCCTCTCTGTACATTTC
TGGCCTCATAGCTTCCTTATTTGCCTCCACAGTCACCAGAGCCTTCGGCC
GCAAGGCATCAATCCTGGTCGGCGGCACGGCATTTCTTGCTGGTTCAGCC
ATAGGGGGCGCTGCATTAAACATTTACATGCTGATATTTGGGCGTGTGTT
GCTAGGTGTTGGGATTGGTTTTACAAACCAATCAGTGCCGCTATATCTCT
CAGAAATGGCACCACCAAAACACAGAGGAGCATTCACCATTGGCTTCCAA
GTATGTGTTGCCATTGGTGTCCTATCCGCTAATCTTCTCAATT
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