CN188147

Overview
NameCN188147
Unique NameCN188147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: INT1_ARATH (Probable inositol transporter 1 OS=Arabidopsis thaliana GN=INT1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 43/162 (26.54%), Postives = 75/162 (46.30%), Query Frame = 1
Query:  157 IVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            + A  GGL+FGYD G+  G                  +K+D ++     F   L     S   +  +I +     +   +GRK + L     F AG+ +  AA + Y+LI GR+L+G+G+G  + + P+Y++E +P + RG       + +  G   + L+N
Sbjct:   36 VTAGIGGLLFGYDTGVISGALLY--------------IKDDFEVVKQSSF---LQETIVSMALVGAMIGAAAGGWINDYYGRKKATLFADVVFAAGAIVMAAAPDPYVLISGRLLVGLGVGVASVTAPVYIAEASPSEVRGGLVSTNVLMITGGQFLSYLVN 180          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR5_HUMAN (Solute carrier family 2, facilitated glucose transporter member 5 OS=Homo sapiens GN=SLC2A5 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 50/180 (27.78%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLI-FGYDIGISGGVTSMEPFLKKFFPEVYR----KMKEDTKISNYCKFDSQLLAAFTSSLY-ISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGA---ALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            G++T+ + L+ ++AA G    +GY++     V S    +++F+ E Y     +  ED        F   LL + T S++   G I SL    +   FGRK ++L      +  + + G    A +  ++I  R+L+G+  G ++  VP+YL E+AP   RGA  +  Q+ + +G+L A +
Sbjct:   11 GRLTLVLALATLIAAFGSSFQYGYNVA---AVNSPALLMQQFYNETYYGRTGEFMED--------FPLTLLWSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVATSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQI 179          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR10_XENLA (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus laevis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.521e-12
Identity = 49/173 (28.32%), Postives = 80/173 (46.24%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            G  +  +VL+   +  GGLIFGY++GI  G   M   LK  F                  F+ +   A  S++    L+ASL    +    GR+ SI+      LAGS I  A  + + L+ GRV +G  I  ++ +  +Y+SE+  P  RG     ++  + +G+L +  +N
Sbjct:    2 GLRSTTLVLAATSSLLGGLIFGYELGIISGALLM---LKTVF--------------QLTCFEQE---ALVSAVLFGALLASLIGGFIIDRSGRRTSIMGSNLVVLAGSIILIATSSFWWLVVGRVTVGFAISISSMACCIYVSEIVRPHQRGTLVSLYETGITVGILISYAMN 154          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR5_PONAB (Solute carrier family 2, facilitated glucose transporter member 5 OS=Pongo abelii GN=SLC2A5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 50/180 (27.78%), Postives = 90/180 (50.00%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLI-FGYDIGISGGVTSMEPFLKKFFPEVYR----KMKEDTKISNYCKFDSQLLAAFTSSLY-ISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGA---ALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            G++T+ + L+ ++AA G    +GY++     V S    +++F+ E Y     +  ED        F   LL + T S++   G I SL    +   FGRK ++L      +  + + G    A +  ++I  R+L+G+  G ++  VP+YL E+AP   RGA  +  Q+ + +G+L A +
Sbjct:   11 GRLTLVLALATLIAAFGSSFQYGYNVA---AVNSPALLMQQFYNETYYGRTGEFMED--------FPLTLLWSVTVSMFPFGGFIGSLLVGPLVNKFGRKGALLFNNIFSIVPAILMGCSRVAKSFELIIISRLLVGICAGVSSNVVPMYLGELAPKNLRGALGVVPQLFITVGILVAQI 179          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR4_BOVIN (Solute carrier family 2, facilitated glucose transporter member 4 OS=Bos taurus GN=SLC2A4 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 1
Query:   94 ITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLY-ISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGG---AALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLL 639
            I SE G     ++T  +VL+   A  G L FGY+IG+   + + +  +++ + E +   +      +        L A + +++ + G+I+S     +++  GRK ++L      + G  + G   AA +  MLI GR  +G   G T+  VP+Y+ E+AP   RGA     Q+ +  G+L A +L
Sbjct:    8 IGSEDGEPPRQRVTGTLVLAVFSAVLGSLQFGYNIGV---INAPQKVIEQSYNETWLGRQGPEGPGSIPPGTLTTLWALSVAIFSVGGMISSFLIGIISQWLGRKRAMLFNNALAVLGGTLMGLAKAAASYEMLILGRFFIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAIVTGILIAQVL 190          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR3_SHEEP (Solute carrier family 2, facilitated glucose transporter member 3 OS=Ovis aries GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 49/173 (28.32%), Postives = 81/173 (46.82%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGG---AALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            K+T  ++ +  +A  G   FGY+ G+   + + E  +K F      +  E    S        L  A  S   + G+I S         FGR+ S+L+     +AG  + G    A ++ MLI GR+++G+  G     VP+Y+ E++P   RGAF    Q+ + IG+L A +
Sbjct:    5 KVTTPLIFAISIATIGSFQFGYNTGV---INAPEAIIKDFLNYTLEERSETPPSSVLLTSLWSLSVAIFS---VGGMIGSFSVGLFVNRFGRRNSMLIVNLLAIAGGCLMGFCKIAESVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQI 171          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR10_XENTR (Solute carrier family 2, facilitated glucose transporter member 10 OS=Xenopus tropicalis GN=slc2a10 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.516e-12
Identity = 46/167 (27.54%), Postives = 80/167 (47.90%), Query Frame = 1
Query:  142 VVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            ++L+  V+  GG++FGY++GI  G   +          VY+           C F+ +   A  S++    L+ASL    +   +GR+ +IL      LAGS I  A    + LI GRV +G  I  ++ +  +Y+SE+  P  RG     ++  + +G+L +  +N
Sbjct:    8 LILAATVSLLGGIVFGYELGIISGALLV-------LKTVYQLT---------C-FEQE---ALVSAVLFGALLASLIGGIIIDRWGRRTAILASNLVVLAGSIILIATSTFWWLIVGRVTIGFAISISSMACCIYVSEIVRPHQRGMLVSLYETGITVGILISYAMN 154          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: PLT2_ARATH (Putative polyol transporter 2 OS=Arabidopsis thaliana GN=PLT2 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.112e-11
Identity = 47/173 (27.17%), Postives = 78/173 (45.09%), Query Frame = 1
Query:  124 GKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            G  + F     I+A+   +I GYDIG+  G                  +K+D K+S+        L      L I  LI S  A   +   GR+ +I++ G  F  G+ + G A N   ++ GR + G+G+G+     P+Y +E+AP   RG  +   ++ + IG+L   + N
Sbjct:   20 GNRSRFAFACAILASMTSIILGYDIGVMSGAAIF--------------IKDDLKLSDV------QLEILMGILNIYSLIGSGAAGRTSDWIGRRYTIVLAGFFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTTEVAPASSRGFLSSFPEIFINIGILLGYVSN 172          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 52/181 (28.73%), Postives = 90/181 (49.72%), Query Frame = 1
Query:   88 LAITSEGGRYYNGKMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSA 630
            + + SEG    +G +  FV ++C+    G ++FGY +G+  G  ++E   K         + E+T +  +    S LLA  T   +  G +A          FGR  +  +       G+ +   A ++  +I GR+L G+GIG ++  VPLY+SE++P + RGA     Q+ + IG+L+A
Sbjct:   93 IPLRSEGKS--SGTVLPFVGVACL----GAILFGYHLGVVNG--ALEYLAKDL------GIAENTVLQGWIV--SSLLAGATVGSFTGGALAD--------KFGRTRTFQLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAA 249          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: ITR1_SCHPO (Myo-inositol transporter 1 OS=Schizosaccharomyces pombe GN=itr1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.453e-11
Identity = 46/164 (28.05%), Postives = 75/164 (45.73%), Query Frame = 1
Query:  139 FVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSA 630
            +V +    A  GGL+FGYD G+  G              V        +++N  K         TS+  +  L+  + A  +   FGRK  I +     + GS +   A +++ +I GR ++G G+G  +  +PLYLSE+AP K RG   I + + +  G + A
Sbjct:   86 WVWVLAFAAGIGGLLFGYDTGVISGALV-----------VIGTSLGGHELTNGGK------EFITSATSLGALLGGIIAGALADFFGRKPVIAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLYLSEIAPSKIRGRLVIIYVLLITAGQVIA 232          
The following BLAST results are available for this feature:
BLAST of CN188147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
INT1_ARATH6.521e-1226.54Probable inositol transporter 1 OS=Arabidopsis tha... [more]
GTR5_HUMAN6.521e-1227.78Solute carrier family 2, facilitated glucose trans... [more]
GTR10_XENLA6.521e-1228.32Solute carrier family 2, facilitated glucose trans... [more]
GTR5_PONAB8.516e-1227.78Solute carrier family 2, facilitated glucose trans... [more]
GTR4_BOVIN8.516e-1227.42Solute carrier family 2, facilitated glucose trans... [more]
GTR3_SHEEP8.516e-1228.32Solute carrier family 2, facilitated glucose trans... [more]
GTR10_XENTR8.516e-1227.54Solute carrier family 2, facilitated glucose trans... [more]
PLT2_ARATH1.112e-1127.17Putative polyol transporter 2 OS=Arabidopsis thali... [more]
PLST4_ARATH1.453e-1128.73Plastidic glucose transporter 4 OS=Arabidopsis tha... [more]
ITR1_SCHPO1.453e-1128.05Myo-inositol transporter 1 OS=Schizosaccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188147 ID=CN188147; Name=CN188147; organism=Citrus sinensis; type=EST; length=643bp
ATTTTAACTTTTCTCACTCTCCTTTCTCTCTTGCTGTGACTGCTGATTAG
TTTTGAAGATAAAGCAGCAGCCAATATGGCAGCAGGCTTAGCAATAACTA
GTGAAGGCGGGCGGTATTACAACGGGAAGATGACTGTATTTGTTGTCTTG
TCTTGTATTGTTGCTGCCACCGGTGGGCTTATATTCGGCTATGATATTGG
AATTTCAGGTGGAGTGACATCAATGGAGCCATTTTTGAAGAAGTTTTTCC
CGGAAGTGTACAGAAAGATGAAAGAAGACACCAAGATAAGCAATTATTGC
AAGTTTGACAGCCAATTATTAGCCGCGTTCACGTCCTCTCTGTACATTTC
TGGCCTCATAGCTTCCTTATTTGCCTCCACAGTCACCAGAGCCTTCGGCC
GCAAGGCATCAATCCTGGTCGGCGGCACGGCATTTCTTGCTGGTTCAGCC
ATAGGGGGCGCTGCATTAAACATTTACATGCTGATATTTGGGCGTGTGTT
GCTAGGTGTTGGGATTGGTTTTACAAACCAATCAGTGCCGCTATATCTCT
CAGAAATGGCACCACCAAAACACAGAGGAGCATTCACCATTGGCTTCCAA
GTATGTGTTGCCATTGGTGTCCTATCCGCTAATCTTCTCAATT
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