CN188147

Overview
NameCN188147
Unique NameCN188147
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length643
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 51/174 (29.31%), Postives = 87/174 (50.00%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYR-KMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGT-AFLAGSAIGGA--ALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            KMT  ++L+   A  G L FGY+ G+   +   +  ++ F+   +  + +E    +      S  +A F+    + G+I S         FGR+ S+L+    AFLA   +G +  AL+  MLI GR ++G+  G T   VP+Y+ E++P   RGA     Q+ + +G+L A +
Sbjct:    6 KMTARLMLAVGGAVLGSLQFGYNTGV---INRPQKVIEDFYNHTWLYRYEEPISPATLTTLWSLSVAIFS----VGGMIGSFSVGLFVNRFGRRNSMLMSNILAFLAAVLMGFSKMALSFEMLILGRFIIGLYSGLTTGFVPMYVGEVSPTALRGALGTFHQLGIVLGILIAQV 172          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GHT1_SCHPO (High-affinity glucose transporter ght1 OS=Schizosaccharomyces pombe GN=ght1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.520e-11
Identity = 43/163 (26.38%), Postives = 73/163 (44.79%), Query Frame = 1
Query:  157 IVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIF-GRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            +  +  G +FG D G  GG+T+M  F  +F             +++   + S      T  + +      L +S  T   G++ SI+     +L G  I   A+  ++ I   ++  G+GIG  +   P Y SE+APP  RG   + +Q+CV  G+  A  +N
Sbjct:   11 LFVSMAGWMFGADTGSIGGITNMRDFQSRFADRY-------NPVTDTYSYSSARQGLITGMVNVGSFFGCLISSPTTDRIGKRNSIIGFCVIYLIGVIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPGYQSEVAPPHIRGTIVVTYQLCVTAGIFIAACIN 166          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GHT2_SCHPO (High-affinity glucose transporter ght2 OS=Schizosaccharomyces pombe GN=ght2 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.209e-11
Identity = 44/169 (26.04%), Postives = 76/169 (44.97%), Query Frame = 1
Query:  139 FVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIF-GRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANLLN 642
            F ++  I  +  G +FG D G  GGVTSM  F +++             I++     S      T  + +  L   + +S +   FG++ SI+     ++ G  +   A+  ++ I   ++  G+GIG  +   P Y SE APP  RG   + +Q+ V  G+  A  +N
Sbjct:    9 FTLVMLIFVSMAGWMFGADTGSIGGVTSMRDFRERYADRY-------DPITDQYSLSSARQGLLTGMVNVGSLFGCIISSPIADRFGKRLSIIGFCAVYIIGIIVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIFIAACIN 170          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: YD387_YEAST (Probable metabolite transport protein YDR387C OS=Saccharomyces cerevisiae GN=YDR387C PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 1
Query:  130 MTVFVVLSCIVAATGGLIFGYDIG-ISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRG 579
            +T    L  + A  GGL+FGYD G ISG + S++P              ED  +        +L+   TSS  +     S+ A  +   +GR+ ++ +  + F+  +     A  +  LI GR+L+G+ +G + Q VPL+LSE++P + RG
Sbjct:   35 LTFKTSLIFVGATIGGLLFGYDTGVISGVLLSLKP--------------EDLSLVVLTDVQKELI---TSSTSVGSFFGSILAFPLADRYGRRITLAICCSIFILAAIGMAIARTLTFLICGRLLVGIAVGVSAQCVPLFLSEISPSRIRG 168          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: QAY_NEUCR (Quinate permease OS=Neurospora crassa GN=qa-y PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 47/162 (29.01%), Postives = 76/162 (46.91%), Query Frame = 1
Query:  160 VAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYISG-LIASLFASTVTRAFGRKASILVGGTAFLAGSAI----GGAALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHR----GAFTIGFQVCVAIG 618
            +A+    + GYD    G   ++  F K+F              ++Y      LL +   S+Y +G     LFA   +   GR+ S++     F+ G+AI     G    I  +I GRVL G+G+G  +  VP+Y+SE+APP  R    G + +G+Q+   +G
Sbjct:   27 IASFASCMIGYDSAFIGTTLALPSFTKEF------------DFASYTPGALALLQSNIVSVYQAGAFFGCLFAYATSYFLGRRKSLIAFSVVFIIGAAIMLAADGQGRGIDPIIAGRVLAGIGVGGASNMVPIYISELAPPAVRGRLVGIYELGWQIGGLVG 176          
BLAST of CN188147 vs. ExPASy Swiss-Prot
Match: GTR3_PONAB (Solute carrier family 2, facilitated glucose transporter member 3 OS=Pongo abelii GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 9.416e-11
Identity = 48/176 (27.27%), Postives = 84/176 (47.73%), Query Frame = 1
Query:  127 KMTVFVVLSCIVAATGGLIFGYDIGISGGVTSMEPFLKKFFPEVYRKMKEDTKISNYCKFDSQLLAAFTSSLYI---SGLIASLFASTVTRAFGRKASILVGGTAFLAGSAIGG---AALNIYMLIFGRVLLGVGIGFTNQSVPLYLSEMAPPKHRGAFTIGFQVCVAIGVLSANL 636
            K+T  ++ +  VA  G   FGY+ G+   + + E  +K+F  +        T   N    +  L + ++ S+ I    G+I S         FGR+ S+L+     + G    G    A ++ MLI GR+++G+  G     VP+Y+ E++P   RGAF    Q+ + +G+L A +
Sbjct:    5 KVTPALIFAITVATIGSFQFGYNTGV---INAPEKIIKEFINKTL------TDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQI 171          
The following BLAST results are available for this feature:
BLAST of CN188147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 86
Match NameE-valueIdentityDescription
GTR1_CHICK5.520e-1129.31Solute carrier family 2, facilitated glucose trans... [more]
GHT1_SCHPO5.520e-1126.38High-affinity glucose transporter ght1 OS=Schizosa... [more]
GHT2_SCHPO7.209e-1126.04High-affinity glucose transporter ght2 OS=Schizosa... [more]
YD387_YEAST9.416e-1129.80Probable metabolite transport protein YDR387C OS=S... [more]
QAY_NEUCR9.416e-1129.01Quinate permease OS=Neurospora crassa GN=qa-y PE=3... [more]
GTR3_PONAB9.416e-1127.27Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188147 ID=CN188147; Name=CN188147; organism=Citrus sinensis; type=EST; length=643bp
ATTTTAACTTTTCTCACTCTCCTTTCTCTCTTGCTGTGACTGCTGATTAG
TTTTGAAGATAAAGCAGCAGCCAATATGGCAGCAGGCTTAGCAATAACTA
GTGAAGGCGGGCGGTATTACAACGGGAAGATGACTGTATTTGTTGTCTTG
TCTTGTATTGTTGCTGCCACCGGTGGGCTTATATTCGGCTATGATATTGG
AATTTCAGGTGGAGTGACATCAATGGAGCCATTTTTGAAGAAGTTTTTCC
CGGAAGTGTACAGAAAGATGAAAGAAGACACCAAGATAAGCAATTATTGC
AAGTTTGACAGCCAATTATTAGCCGCGTTCACGTCCTCTCTGTACATTTC
TGGCCTCATAGCTTCCTTATTTGCCTCCACAGTCACCAGAGCCTTCGGCC
GCAAGGCATCAATCCTGGTCGGCGGCACGGCATTTCTTGCTGGTTCAGCC
ATAGGGGGCGCTGCATTAAACATTTACATGCTGATATTTGGGCGTGTGTT
GCTAGGTGTTGGGATTGGTTTTACAAACCAATCAGTGCCGCTATATCTCT
CAGAAATGGCACCACCAAAACACAGAGGAGCATTCACCATTGGCTTCCAA
GTATGTGTTGCCATTGGTGTCCTATCCGCTAATCTTCTCAATT
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