CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 1.356e-36
Identity = 83/216 (38.43%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF VT+   G   I   Y GE ++F+  ++  M+L+ +K +AES L   V D  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  HF  +F+++Y  D+  N RA  RLR ACE+ K+ LS++ +  L I+ L
Sbjct:   74 RRFDDPSVQSDMKHWPFEVTQ-VGGKLKICVEYKGEKKMFSAEEISSMVLTKMKEVAESYLGRTVSDAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL---DKKVGGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVDHFVKEFQKKYNKDIRSNKRALRRLRTACERAKRTLSSSAQTNLEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_CANAL (Heat shock protein SSB1 OS=Candida albicans GN=SSB1 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 81/216 (37.50%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R F D  +Q+D+KS PF V E  +G PLI   YL ET+ F+P ++  M+L+ +K IAE+ +   V    + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+         + +V   D+G  +  V +     G   +   + D  +GG+DFD  L +HF  +F+++   D+S +ARA  RLR ACE+ K+ LS+  +  + I+ L
Sbjct:   78 RAFDDESVQKDIKSWPFKVVES-NGQPLIEVEYLDETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAG--KSEKERHVLIFDLGGGTFDVSLLNITGGVFTVKATAGDTHLGGQDFDTNLLEHFKKEFQKKTGNDISSDARALRRLRTACERAKRSLSSGTQTTVEIDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_TRIRU (Heat shock 70 kDa protein OS=Trichophyton rubrum GN=HSP70 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 81/216 (37.50%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+D E+Q D+K  PF V E   G P++   + GE + FTP ++  M+L+ ++  AE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA  +AYG+   D   + + NV   D G  +  V +   ++G  ++   + D  +GG +FD  L  HF  +FK + K D+S NARA  RLR ACE+ K+ LS+  +  + I+ L
Sbjct:   74 RKFNDAEVQADMKHFPFKVVE-KSGKPIVQVEFKGEEKQFTPEEISSMVLTKMRETAEAYLGGTVNNAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAGGIAYGL---DKKADGERNVLIFDFGGGTFDVSLLTIEEGIFEVKSTAGDTQLGGEEFDNRLVNHFVNEFKRKNKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP68_DROME (Heat shock protein 68 OS=Drosophila melanogaster GN=Hsp68 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 87/217 (40.09%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQL-KILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D ++Q D+K  PF V    +G P I   + G  + F+P ++  M+L+ +K  AE+ L   V D  I +P YF D QR+A  DA  IAG++ LR+ +E TA ALAYG+ K    E    NV   D+G  +  V I    +G L ++   + D  +GG DFD  L  HFA +FK +YK D+  N RA  RLR A E+ K+ LS++ EA L I+ L
Sbjct:   73 RRFDDSKIQEDIKHWPFKVIND-NGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGER---NVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDAL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 1.771e-36
Identity = 84/217 (38.71%), Postives = 126/217 (58.06%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAV-TEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSD  +Q D+K  PF V T   D  PLI   + GET+ F+P ++  M+LS +K  AES L   V +  I +P YF D QR+A  DA TI+ L+  R+ +E +A A+AYG+ K    ++ ++ V   D+G  +  V +     G  ++L  + D  +GG DFD  L  HF  +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   73 RKFSDSVVQSDMKHWPFKVITNKNDDKPLIQVDFKGETKTFSPEEISSMVLSKMKETAESYLGKPVNNAVITVPAYFNDGQRQATKDAGTISKLNVQRIINEPSAAAIAYGLDKKG-SKSGEIKVLIFDLGGGTFDVSLLSIDDGVFEVLATAGDTHLGGEDFDNRLVNHFVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEIDSL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.313e-36
Identity = 81/216 (37.50%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+D  +Q D+K  PF V    DG P++ A Y+GET+  +P +V  M+L+ +K  AE+ L   V    I +P YF D QR+A  DA  IAG++ LR+ +E T  ALAYG+   D     + +V   D+G  +  V +     G  ++L  + D  +GG DFD  L  H + +FK +YK D+  N RA  RLR A E+ K+ LS++ +A + ++ L
Sbjct:   76 RRFNDSSIQADMKHWPFRVIN-KDGKPMLQAEYMGETKTLSPEEVSSMVLTKMKETAEAYLGKKVTSAVITVPAYFNDAQRQATKDAGVIAGINVLRIINEPTRAALAYGL---DKKLTGEKHVLIFDLGGGTFDVSLLAIDDGVFEVLTTAGDTHLGGEDFDNRLVNHTSLEFKRKYKKDMRTNPRAIRRLRTAAERAKRTLSSSAQANIEVDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.313e-36
Identity = 80/217 (36.87%), Postives = 128/217 (58.99%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEY-KIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DPE+Q D+K  PF +T+   G P+I   + GET+ FTP ++  M+L+ ++  AE+ L   V +  + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D   + + NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L  HF ++FK ++ KI  ++ ARA  R   ACE+ K+ LS+  +  + I+ L
Sbjct:   74 RKFADPEVQADMKHFPFKITD-KGGKPVIQVEFKGETKEFTPEEISSMVLTKMRETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL---DKKADGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVSEFKRKFKKISPAERARALRRSPTACERAKRTLSSAAQTSIEIDSL 286          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_ARATH (Heat shock cognate 70 kDa protein 1 OS=Arabidopsis thaliana GN=HSC70-1 PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 76/216 (35.19%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSD  +Q D+K  PF +  GP   P+I+  Y GE + F   ++  M+L  ++ IAE+ L   + +  + +P YF D QR+A  DA  IAGL+ +R+ +E TA A+AYG+ K      ++ NV   D+G  +  V +   ++G  ++   + D  +GG DFD  +  HF  +FK + K D++ N RA  RLR +CE+ K+ LS+  +  + I+ L
Sbjct:   79 RRFSDSSVQSDMKLWPFKIQAGPADKPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEK-NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKSKKDITGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSL 293          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 151.754 bits (382), Expect = 3.021e-36
Identity = 81/216 (37.50%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSD E+Q D+K  PF V       P I   + GET+VF+P ++  M+L  +K  AE+ L   + +  I +P YF D QR+A  DA TI+ L+  R+ +E TA A+AYG+ K    E    N+   D+G  +  V +   + G  ++   + D  +GG DFD  L  HF  +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   73 RKFSDKEVQSDMKHWPFKVIPKDGDKPHIQVEFKGETKVFSPEEISSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGTISKLNVQRIINEPTAAAIAYGLEKKGSGEK---NILIFDLGGGTFDVSLLTIEDGVFEVKATAGDTHLGGEDFDNRLVSHFVDEFKRKHKKDIMGNQRAVRRLRTACERAKRTLSSSAQASIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 3.945e-36
Identity = 86/217 (39.63%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQL-KILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R++ DP++  D+K  PF V     G P I   Y GE++ F P ++  M+L+ +K  AE+ L  ++ D  I +P YF D QR+A  DA  IAGL+ LR+ +E TA ALAYG+ K    E    NV   D+G  +  V I    +G L ++   + D  +GG DFD  L  H A +FK +YK D+  N RA  RLR A E+ K+ LS++ EA + I+ L
Sbjct:   73 RKYDDPKIAEDMKHWPFKVVSD-GGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKGER---NVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDAL 285          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_SCHMA1.356e-3638.43Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP75_CANAL1.771e-3637.50Heat shock protein SSB1 OS=Candida albicans GN=SSB... [more]
HSP70_TRIRU1.771e-3637.50Heat shock 70 kDa protein OS=Trichophyton rubrum G... [more]
HSP68_DROME1.771e-3640.09Heat shock protein 68 OS=Drosophila melanogaster G... [more]
HS7C3_DICDI1.771e-3638.71Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP74_PARLI2.313e-3637.50Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP70_AJECA2.313e-3636.87Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HSP71_ARATH3.021e-3635.19Heat shock cognate 70 kDa protein 1 OS=Arabidopsis... [more]
HS7C1_DICDI3.021e-3637.50Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]
HSP75_DROME3.945e-3639.63Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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