CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.148e-35
Identity = 80/216 (37.04%), Postives = 126/216 (58.33%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K+ PF V +  +G P+I   YLGET+ F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+         + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF A+FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDDESVQSDMKTWPFKVIDA-NGSPMIEVEYLGETKSFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAG--KSEKERHVLIFDLGGGTFDVSLLNIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISGDARALRRLRTAAERAKRTLSSVTQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.499e-35
Identity = 82/217 (37.79%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKF-KEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF VT GP+G P I   + GE + F   ++  M+L+ +K IAE+ L  +V D  I +P YF D QR+A  DA TIAGL+ +R+ +E TA A+AYG+   D     + NV   D+G  +  V I   + G  ++   + D  +GG DFD +L +H    F +     ++S N RA  RLR  CE+ K+VLS++ +A + ++ L
Sbjct:   75 RKFDDRTVQEDMKHWPFKVTNGPNGKPNIEVTFQGEKKTFHAEEISSMVLTKMKEIAEAFLGKSVKDVVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGL---DKKGGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNLLVEHCVRDFMRLNNGKNISSNKRALRRLRTHCERAKRVLSSSTQATIELDSL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_SOLLC (Heat shock cognate 70 kDa protein 2 OS=Solanum lycopersicum GN=HSC-2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.958e-35
Identity = 78/216 (36.11%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSD  +Q D+K  PF V  GP   P+I   Y GE + F+  ++  M+L  +K IAE+ L   V +  + +P Y  D QR+A  DA  I+GL+ +R+ +E TA A+AYG+ K      ++ NV   D+G  +  V +   ++G  ++   + D  +GG DFD  +  HF  +FK + K D++ N RA  RLR ACE+ K+ LS+  +  + I+ L
Sbjct:   79 RRFSDASVQSDMKLWPFKVIPGPGDKPMIVVNYKGEEKQFSAEEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYSNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSVGEK-NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSL 293          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 81/216 (37.50%), Postives = 121/216 (56.02%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF V     G P +   Y GE + F P ++  M+L  +K IAE+ L  ++ +  I +P YF D QR+   DA TI+GL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V I   + G   +   + D  +GG DFD  +  HF A+FK ++K D+S N RA  RL  ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RRFEDSVVQADMKHWPFKVISD-GGRPRLEVEYKGEAKNFYPEEISSMVLVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAYGL---DKKVGSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 82/216 (37.96%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            RQF D  +Q D+K  PF V    +  P +   Y GE++ F P ++  M+L+ +K IAE+ L   V +  I +P Y  D QR+A  DA TI+GL+ L + +E TA A+AYG+   D     + NV   D+G  S  V I   + G  ++   + D  +GG DFD  +  HF  +FK ++K D+S N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RQFDDGVVQSDMKHWPFNVIND-NSRPKVQVEYKGESKSFYPEEISSMVLTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNVLVIINEPTAAAIAYGL---DKKVGAERNVLIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKHKKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP76_YEAST (Heat shock protein SSB2 OS=Saccharomyces cerevisiae GN=SSB2 PE=1 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 79/216 (36.57%), Postives = 127/216 (58.80%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q+D+K+ PF V +  DG P+I  +YL ET+ F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA  I+GL+ LR+ +E TA A+AYG+         + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF A+FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDDESVQKDMKTWPFKVID-VDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAG--KSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_YEAST (Heat shock protein SSB1 OS=Saccharomyces cerevisiae GN=SSB1 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 2.557e-35
Identity = 79/216 (36.57%), Postives = 127/216 (58.80%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q+D+K+ PF V +  DG P+I  +YL ET+ F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA  I+GL+ LR+ +E TA A+AYG+         + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF A+FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDDESVQKDMKTWPFKVID-VDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAG--KSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRRLRTAAERAKRTLSSVTQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP76_HUMAN (Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSPA6 PE=1 SV=2)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 84/217 (38.71%), Postives = 122/217 (56.22%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+D  +Q D+K  PF  V+EG  G P +   Y GE + F P ++  M+LS +K  AE+ L   V    I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +    E    NV   D+G  +  V +     G  ++   + D  +GG DFD  L  HF  +F+ ++  D+S N RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   78 RKFADTTVQSDMKHWPFRVVSEG--GKPKVRVCYRGEDKTFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLDRRGAGER---NVLIFDLGGGTFDVSVLSIDAGVFEVKATAGDTHLGGEDFDNRLVNHFMEEFRRKHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: GRP78_ASHGO (78 kDa glucose-regulated protein homolog OS=Ashbya gossypii GN=KAR2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.340e-35
Identity = 77/213 (36.15%), Postives = 123/213 (57.75%), Query Frame = 1
Query:    7 QFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIE 645
            +++D  +QR++K LPF V +  +G P +     GE ++FTP ++ GM+L  +K IAE  L   V    + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ KT+    D+  +   D+G  +  V +   + G  ++   + D  +GG DFD  L +HF   FK+++ +DVS NA+A  +L+   EK K+ LS+     + I+
Sbjct:  120 KYNDKTVQREIKHLPFEVVD-KNGMPAVAVTVKGERKLFTPEEISGMVLGKMKQIAEEYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGLDKTE----DEHRIVVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFLKVFKKKHGVDVSSNAKAMAKLKREAEKAKRALSSQMSTRVEID 327          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.362e-35
Identity = 79/216 (36.57%), Postives = 119/216 (55.09%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSDP +Q D+K  PF V       P +   + GE + F+P +V  M+L  +K  AE+ L   + +  I +P YF D QR+A  DA  IA L+  R+ +E TA A+AYG+ K    E    N+   D+G  +  V +   + G  ++   + D  +GG DFD  L  HF  +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   74 RKFSDPVIQSDMKHWPFKVIAKEGDKPHLQVEFKGEVKTFSPEEVSSMVLLKMKETAEAYLGKTINNAVITVPAYFNDSQRQATKDAGAIAKLNVQRIINEPTAAAIAYGLEKKSQGER---NILIFDLGGGTFDVSLLTIEDGVFEVKATAGDTHLGGEDFDNRLVNHFVDEFKRKHKKDLMTNQRALRRLRTACERAKRTLSSSAQASIEIDSL 286          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_ASHGO1.148e-3537.04Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]
HSP70_THEPA1.499e-3537.79Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP72_SOLLC1.958e-3536.11Heat shock cognate 70 kDa protein 2 OS=Solanum lyc... [more]
HSP7C_ICTPU2.557e-3537.50Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7C_DANRE2.557e-3537.96Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]
HSP76_YEAST2.557e-3536.57Heat shock protein SSB2 OS=Saccharomyces cerevisia... [more]
HSP75_YEAST2.557e-3536.57Heat shock protein SSB1 OS=Saccharomyces cerevisia... [more]
HSP76_HUMAN3.340e-3538.71Heat shock 70 kDa protein 6 OS=Homo sapiens GN=HSP... [more]
GRP78_ASHGO3.340e-3536.1578 kDa glucose-regulated protein homolog OS=Ashbya... [more]
HS7C2_DICDI4.362e-3536.57Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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