CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35
Identity = 78/216 (36.11%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F +  +Q D+K+ PF V +  +G PLI   YLGET+ F+P ++  M+L+ +K IAE+ +   V    + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   +     + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF  +FK++   D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDEESVQSDMKTWPFKVIDS-NGAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGVGAGN--SEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKTEFKKKTGADISGDARALRRLRTAAERAKRTLSSVAQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 7.440e-35
Identity = 78/216 (36.11%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F +  +Q D+K+ PF V +  D  PLI   YLGET+ F+P ++  M+L+ +K IAE+ +   V    + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+       + + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF  +FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDEESVQSDMKTWPFKVIDSNDA-PLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAG--KSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKTEFKKKTGLDISGDARALRRLRTAAERAKRTLSSVAQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 81/217 (37.33%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R++ DP +Q D+K  PF  V EG  G P +   Y GE + F P ++  M+L+ +K IAE+ L   V    I +P YF D QR+A  DA TI GL+ +R+ +E TA A+AYG+ K      ++ NV   D+G  +  V I   + G  ++   + D  +GG DFD  +   F  +FK ++K D + N RA  RLR ACE+ ++ LS++ +A + I+ L
Sbjct:   77 RKYDDPTVQSDMKHWPFRVVNEG--GKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGKKVETAVITVPAYFNDSQRQATKDAGTITGLNVMRIINEPTAAAIAYGLDKKGTRAGEK-NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNRFVEEFKGKHKRDNAGNKRAVRRLRTACERARRTLSSSTQASIEIDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: GRP78_KLULA (78 kDa glucose-regulated protein homolog OS=Kluyveromyces lactis GN=GRP78 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 9.717e-35
Identity = 77/213 (36.15%), Postives = 121/213 (56.81%), Query Frame = 1
Query:    7 QFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIE 645
            Q++DP +QRD+K LP+ V       P +     GE + FTP +V GM+L  +K IAE  L   V    + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ KT+    D+  +   D+G  +  V +   + G  ++   + D  +GG DFD  L +HFA  F++++ +DV++N +A  +L+   EK K+ LS+     + I+
Sbjct:  124 QYNDPTVQRDIKHLPYTVVN-KGNKPYVEVTVKGEKKEFTPEEVSGMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGLNILRIVNEPTAAAIAYGLDKTE----DEHQIIVYDLGGGTFDVSLLSIENGVFEVQATAGDTHLGGEDFDYKLVRHFAQLFQKKHDLDVTKNDKAMAKLKREAEKAKRSLSSQTSTRIEID 331          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_LEIMA (Heat shock 70 kDa protein (Fragment) OS=Leishmania major GN=HSP70 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.269e-34
Identity = 81/217 (37.33%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYK-IDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+D  +Q D+K  PF VT   D  P+I  +Y GE + FTP ++  M+L  +K  AE+ L   V    + +P YF D QR+A  DA TIAGL  +R+ +E TA A+AYG+ K D  +  + NV   D+G  +  V +    +G  ++   + D  +GG DFD  L   F  +FK + K  +++ + RA  RLR ACE+ K+ LS+  +A + I+ L
Sbjct:   76 RKFNDSVVQSDMKHWPFKVTTKGDDKPVISVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVVRIINEPTAAAIAYGLDKGD--DGKERNVLIFDLGGGTFDVTLLTIDRGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKNKGKNLASSHRALRRLRTACERAKRTLSSATQATIEIDAL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.658e-34
Identity = 76/213 (35.68%), Postives = 123/213 (57.75%), Query Frame = 1
Query:    7 QFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIE 645
            +F D  +Q+++K LP+ V +  DG P++ A+  GE + FT  ++  M+L  +K IAE  L   V    + +P YF D QR+A  DA TIAGL  LR+ +E TA A+AYG+ KTD    ++ ++   D+G  +  V +     G  ++L  + D  +GG DFD  + +HF   FK+++ ID+S N++A  +L+   EK K+ LS+     + I+
Sbjct:  113 RFDDKVIQKEIKHLPYKVKD-QDGRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLEVLRIVNEPTAAAIAYGLDKTD----EEKHIIVYDLGGGTFDVSLLTIAGGAFEVLATAGDTHLGGEDFDYRVVRHFIKVFKKKHGIDISDNSKALAKLKREVEKAKRTLSSQMSTRIEID 320          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_ZYGRC (Heat shock protein SSB OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=SSB PE=3 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 76/216 (35.19%), Postives = 127/216 (58.80%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q+D K+ PF + +  +G P++  +YLGET+ F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA +I+GL+ LR+ +E TA A+AYG+         + +V   D+G  +  V +     G   +   S +  +GG+DFD  + +HF  +FK++   D+S +ARA  RLR ACE+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDDESVQKDRKTWPFKLID-VEGNPVVEVQYLGETKTFSPQEISSMVLTKMKEIAEAKIGQKVEKAVITVPAYFNDAQRQATKDAGSISGLNVLRIINEPTAAAIAYGLGAG--KSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNMLEHFKNEFKKKTGNDISGDARALRRLRTACERAKRTLSSVTQTTIEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_KLUDE (Heat shock protein SSB OS=Kluyveromyces delphensis GN=SSB PE=3 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 77/216 (35.65%), Postives = 126/216 (58.33%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F +  +Q D+K+ PF V +  +G P+I   YLGET+ F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA  I+GL+ LR+ +E TA A+AYG+       + + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF + FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDEESVQNDMKTWPFKVVD-VEGAPVIEVEYLGETKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAG--KSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKSDFKKKTGLDISNDARALRRLRTAAERAKRTLSSVTQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_CANGA (Heat shock protein SSB OS=Candida glabrata GN=SSB1 PE=3 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 77/216 (35.65%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F +  +Q D+K+ PF V +  DG P+I   YLGE + F+P ++  M+L+ +K IAE+ +   V    I +P YF D QR+A  DA  I+GL+ LR+ +E TA A+AYG+       + + +V   D+G  +  V +     G   +   S +  +GG+DFD  L +HF  +FK++  +D+S +ARA  RLR A E+ K+ LS+  +  + ++ L
Sbjct:   78 RRFDEESVQNDMKTWPFKVVD-VDGAPVIEVEYLGENKQFSPQEISSMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAG--KSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKGEFKKKTGLDISNDARALRRLRTAAERAKRTLSSVTQTTVEVDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.165e-34
Identity = 78/217 (35.94%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYK-IDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F++  +Q D+K  PF V  G D  P+I   Y GE ++F P ++  M+L  +K  AE+ L  ++ +  I +P YF D QR+A  DA TIAGL+ +R+ +E TA A+AYG++K    E    N+   D+G  +  V +   + G  ++   + D  +GG DFD  L       FK + +  D+S+N+RA  RLR  CE+ K+ LS++ +A + I+ L
Sbjct:   87 RKFTESSVQSDMKHWPFTVKSGVDEKPMIEVTYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLHKKGKGEK---NILIFDLGGGTFDVSLLTIEDGIFEVKATAGDTHLGGEDFDNRLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSL 300          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP75_KLUMA7.440e-3536.11Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_KLULA7.440e-3536.11Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
HSP70_CHICK9.717e-3537.33Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
GRP78_KLULA9.717e-3536.1578 kDa glucose-regulated protein homolog OS=Kluyve... [more]
HSP70_LEIMA1.269e-3437.33Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
GRP78_PICAN1.658e-3435.6878 kDa glucose-regulated protein homolog OS=Pichia... [more]
HSP75_ZYGRC2.165e-3435.19Heat shock protein SSB OS=Zygosaccharomyces rouxii... [more]
HSP75_KLUDE2.165e-3435.65Heat shock protein SSB OS=Kluyveromyces delphensis... [more]
HSP75_CANGA2.165e-3435.65Heat shock protein SSB OS=Candida glabrata GN=SSB1... [more]
HSP70_PLAFA2.165e-3435.94Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
back to top