CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig295 contig Csv1_Contig295:433..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7F_YEAST (Heat shock protein homolog SSE1 OS=Saccharomyces cerevisiae GN=SSE1 PE=1 SV=4)

HSP 1 Score: 187.963 bits (476), Expect = 3.804e-47
Identity = 94/217 (43.32%), Postives = 138/217 (63.59%), Query Frame = 1
Query:   10 FSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN--VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            +  P+ +++ K     + E  D       R+ GE  VF+ TQ+  M +  +K   + +  A + D CI +P ++T+ QR  + DAA IAGL+P+R+ ++ TA  ++YGI+KTDLPE ++    VAFVDIGH+S    I  FKKGQLK+LG + D+  GGRDFD  + +HFA +FK +YKID+ +N +A  R+  A EKLKKVLSAN  AP ++E +M
Sbjct:   76 YHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVM 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7F_CANGA (Heat shock protein homolog SSE1 OS=Candida glabrata GN=SSE1 PE=3 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.488e-47
Identity = 90/217 (41.47%), Postives = 141/217 (64.98%), Query Frame = 1
Query:   10 FSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN--VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            +  P+ Q + K     + +  DG      R+ GE+  F+ TQ+  M ++ +K   E+   A + D CI +P ++T+ QR A  DAA IAGL+P+R+ ++ TA  ++YG++KTDLPE ++    VAF+DIGH+S    I  FKKG+LK+LG ++D++ GGR+FD  + +HFA +FK +YKID+ +N +A  R+  + E+LKKVLSAN  AP ++E +M
Sbjct:   76 YDHPDFQEESKFFTSKLVKLEDGKIGTQVRFAGESTTFSATQLNAMFINKVKQTVETETKANITDVCIAVPTWYTEEQRYAAADAARIAGLNPVRIVNDITAAGVSYGVFKTDLPEGEEKPRIVAFIDIGHSSYTCSIMAFKKGELKVLGTAWDKNFGGRNFDRAITEHFADEFKTKYKIDIRENPKAYNRVMTSAERLKKVLSANTAAPFSVENVM 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7F_SACCA (Heat shock protein homolog SSE1 OS=Saccharomyces castellii GN=SSE1 PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.220e-46
Identity = 90/217 (41.47%), Postives = 138/217 (63.59%), Query Frame = 1
Query:   10 FSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN--VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            ++ P+   + +     + E  D       R  GE++ F+ TQ+  M +  +K   +    + + D CI +P ++++ QR ++ DAA +AGL+P+R+ ++ TA A++YG++KTDLPE D     VAFVDIGH+S    I  FKKG+LK+LG ++D+  GGRDFD  + +HFA +FK +YKID+  NA+A  R+  A EKLKKVLSAN +AP + E +M
Sbjct:   76 YTHPDFSTESQFFSSKLVELDDKKVGTQVRLAGESKTFSATQLAAMFIGKVKNTVQQETKSNINDICIAVPAWYSEEQRYSIADAAKVAGLNPVRIVNDVTAAAVSYGVFKTDLPEGDAKPRIVAFVDIGHSSYTCSIMAFKKGELKVLGTAYDKHFGGRDFDRAITEHFADEFKSKYKIDIRTNAKAYNRILTAAEKLKKVLSANTQAPFSAESVM 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7F_SACKL (Heat shock protein homolog SSE1 OS=Saccharomyces kluyveri GN=SSE1 PE=3 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.205e-46
Identity = 89/217 (41.01%), Postives = 140/217 (64.52%), Query Frame = 1
Query:   10 FSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN--VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            +  P+ +++ K     + +  DG      R+ G+ + F+ TQ+  M ++ +K  A       + D  I +P ++T+ QR ++ DAA IAGL+P+R+ ++ TA A++YG++KTDLPE ++    VAFVDIGH++    IA FKKG+LK+L  ++D+  GGRDFD  + +HFA +FK +YKID+ +N +A  R+  A EKLKKVLSAN  AP ++E +M
Sbjct:   76 YDHPDFEQESKYFSSKLVKLDDGKVGAQVRFAGKQQTFSATQLAAMYINKVKTTAVQETKGNITDVAIAVPAWYTEEQRYSIGDAAKIAGLNPVRIVNDVTAAAVSYGVFKTDLPEGEEKPRVVAFVDIGHSTYTCTIAAFKKGELKVLATAYDKHFGGRDFDRAITEHFADEFKTKYKIDIRENPKAYSRILAAAEKLKKVLSANTAAPFSVESVM 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP79_YEAST (Heat shock protein homolog SSE2 OS=Saccharomyces cerevisiae GN=SSE2 PE=1 SV=3)

HSP 1 Score: 182.185 bits (461), Expect = 2.087e-45
Identity = 85/218 (38.99%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    7 QFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            +F DPE   + K     + +  +G   +   + G+T VF+ TQ+  M +  +K   +    +++ D C+ +PV++++ QR  + DAA IAGL+P+R+ ++ TA A++YG++K DLP  E     +  VDIGH++    I  F+KG++K+LG ++D+  GGRDFD  + +HFA +FK++YKID+ +N +A  R+ +A EKLKKVLSAN  AP ++E +M
Sbjct:   75 KFKDPEFDIENKFFTSKLVQLKNGKVGVEVEFGGKTHVFSATQLTAMFIDKVKHTVQEETKSSITDVCLAVPVWYSEEQRYNIADAARIAGLNPVRIVNDVTAAAVSYGVFKNDLPGPEEKPRIIGLVDIGHSTYTCSIMAFRKGEMKVLGTAYDKHFGGRDFDRAITEHFADQFKDKYKIDIRKNPKAYNRILIAAEKLKKVLSANTTAPFSVESVM 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP88_NEUCR (Heat shock protein Hsp88 OS=Neurospora crassa GN=hsp-88 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 8.769e-44
Identity = 89/187 (47.59%), Postives = 124/187 (66.31%), Query Frame = 1
Query:  100 YLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLP--ENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            YLGE R F+ T+++ M +S +K   ++ +  AV +  + +P +FTD QRR+++DAA IAGL PLRL ++TTA AL +GI K DLP  E     VAFVD+G+++    I  FKKG+L +   + DR  GGR+FD+ L  H   +F  +YKID+  N +A  R+  A EKLKK+LSAN +APLNIE LM
Sbjct:  104 YLGEKRKFSATELIAMFMSKIKQTTQAEVKVAVQELVLSVPAWFTDKQRRSILDAAEIAGLRPLRLINDTTAAALGWGITKLDLPGPEEKPRRVAFVDVGYSNYTCSIVEFKKGELSVKSTACDRHFGGRNFDKALLDHLHKEFLGKYKIDIFTNPKAVCRVLAAAEKLKKILSANQQAPLNIESLM 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.821e-42
Identity = 89/216 (41.20%), Postives = 130/216 (60.19%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DPE+Q D+K  PF V E   G P I   + GET+VFTP ++  M+L+ +K  AES +   V D  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ K +  + +Q N+   D+G  +  V +    +G  ++   + D  +GG DFD  L  HFA +FK +YK D++ N RA  RLR ACE+ K+ LS++ +  + I+ L
Sbjct:   74 RKFDDPEVQNDIKHFPFKVVE-KGGKPHIQVEFKGETKVFTPEEISSMVLTKMKETAESYMGGKVTDAVITVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDKKEQGKGEQ-NILIFDLGGGTFDVSLLSIDEGIFEVKATAGDTHLGGEDFDNRLVNHFANEFKRKYKKDLTTNQRALRRLRTACERAKRTLSSSAQTSVEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_SCHPO (Probable heat shock protein ssa1 OS=Schizosaccharomyces pombe GN=ssa1 PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.072e-41
Identity = 89/216 (41.20%), Postives = 130/216 (60.19%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DPE+Q D+K  PF V E  DG PLI   + GET+ FTP ++  M+L  ++  AE+ L   V D  + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L  HFA +FK + K D++ NARA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   74 RRFNDPEVQSDMKHWPFKVIE-KDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL---DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 166.392 bits (420), Expect = 1.185e-40
Identity = 86/216 (39.81%), Postives = 130/216 (60.19%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DPE+Q D+K  PF V    DG P++   Y GET+ FTP ++  M+L  ++  AE+ L   V D  + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +++  E+   NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L  HF  +FK + K D++ NARA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   74 RKFDDPEVQSDMKHWPFKVIS-KDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGES---NVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSAQASIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 1.185e-40
Identity = 87/216 (40.28%), Postives = 129/216 (59.72%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSDPE+Q D+K  PF V +   G P+I   + GET+VFTP ++  M+L  +K  AE+ L   V +  + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L  HF  +FK ++K D+S NARA  RLR ACE+ K+ LS++ +  + I+ L
Sbjct:   74 RKFSDPEVQADMKHFPFKVIDR-GGKPVIQVEFKGETKVFTPEEISAMILQKMKETAEAYLGGTVNNAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGL---DKKVEGERNVLIFDLGGGTFDVSLLTIEEGIFEVKSTAGDTHLGGEDFDNRLVNHFVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSL 285          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7F_YEAST3.804e-4743.32Heat shock protein homolog SSE1 OS=Saccharomyces c... [more]
HSP7F_CANGA6.488e-4741.47Heat shock protein homolog SSE1 OS=Candida glabrat... [more]
HSP7F_SACCA3.220e-4641.47Heat shock protein homolog SSE1 OS=Saccharomyces c... [more]
HSP7F_SACKL4.205e-4641.01Heat shock protein homolog SSE1 OS=Saccharomyces k... [more]
HSP79_YEAST2.087e-4538.99Heat shock protein homolog SSE2 OS=Saccharomyces c... [more]
HSP88_NEUCR8.769e-4447.59Heat shock protein Hsp88 OS=Neurospora crassa GN=h... [more]
HSP71_PICAN2.821e-4241.20Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP71_SCHPO1.072e-4141.20Probable heat shock protein ssa1 OS=Schizosaccharo... [more]
HSP72_SCHPO1.185e-4039.81Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP70_NEUCR1.185e-4040.28Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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