CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 164.081 bits (414), Expect = 5.882e-40
Identity = 89/216 (41.20%), Postives = 126/216 (58.33%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R F+DPE+Q D+K  PF + +  DG P I   + GET+ FTP Q+  M+L  +K  AES L A V D  + +P YF D QR+A  DA TIAGL+ LR+ +E TA A+AYG+ K    E    +V   D+G  +  V +   + G  ++   + D  +GG DFD  L  HF  +FK + K D+S N RA  RLR ACE+ K+ LS++ +  + I+ L
Sbjct:   74 RNFNDPEVQADMKHFPFKLID-VDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEE----HVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 7.682e-40
Identity = 87/217 (40.09%), Postives = 130/217 (59.91%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGI-YKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R++ DPE Q+D+K  PF V +  +G P I   YLGE + FT  ++  M+L+ +K I+E+ LN  V    I +P YF+D QR A  DA  IAGL+ LR+ +E TA A+AYG+  K+D P+    NV   D+G  +  V +   + G  ++L  + D  +GG DFD  L +HF  +FK + KID+S + RA  RLR ACE+ K+ LS+  +  + ++ L
Sbjct:   78 RRYEDPETQKDIKHWPFKVIDN-NGIPTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDKPK----NVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 7.682e-40
Identity = 89/216 (41.20%), Postives = 126/216 (58.33%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R F+DPE+Q D+K  PF + +  DG P I   + GET+ FTP Q+  M+L  +K  AES L A V D  + +P YF D QR+A  DA TIAGL+ LR+ +E TA A+AYG+ K    E    +V   D+G  +  V +   + G  ++   + D  +GG DFD  L  HF  +FK + K D+S N RA  RLR ACE+ K+ LS++ +  + I+ L
Sbjct:   74 RNFNDPEVQGDMKHFPFKLID-VDGKPQIQVEFKGETKNFTPEQISSMVLGKMKETAESYLGAKVNDAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKGKEE----HVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFIQEFKRKNKKDLSTNQRALRRLRTACERAKRTLSSSAQTSVEIDSL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.003e-39
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V    D  P +   Y GET+ F P ++  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +T   E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   76 RKFGDPVVQSDMKHWPFQVVNDGDK-PKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGER---NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 83/216 (38.43%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V       P +   Y GE ++FTP ++  M+L  +K  AE+ L   V D  + +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D   + + NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  HF A+FK ++K D++ N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIINEPTAAAIAYGL---DKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFCAEFKRKHKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V    D  P +   Y GET+ F P ++  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +T   E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   76 RKFGDPVVQSDMKHWPFQVINDGDK-PKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGER---NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V    D  P +   Y GET+ F P ++  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +T   E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   76 RKFGDPVVQSDMKHWPFQVINDGDK-PKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGER---NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 83/217 (38.25%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLM 654
            R+F DP +Q D+K  PF V       P +  +Y GET++F P ++  M+L  +K IAES L   V +  I +P YF D QR+A  DA  I GL+ LR+ +E TA A+AYG+ K       + NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L   F ++FK +YK DV+ NAR+  RLR ACE+ K+ LS+  +  + I+ L+
Sbjct:   79 RRFQDPAVQEDVKPFPFKVICKDGDKPAVEVKYKGETKIFAPEEISSMVLLKMKEIAESFLGKEVKNAVITVPAYFNDSQRQATKDAGAITGLNVLRIINEPTAAAIAYGLDKKTSGSKSERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNFFVSEFKRKYKKDVTSNARSLRRLRTACERAKRTLSSGTQTTVEIDSLI 295          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V    D  P +   Y GET+ F P ++  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +T   E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   76 RKFGDPVVQSDMKHWPFRVINDGDK-PKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGER---NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.310e-39
Identity = 89/216 (41.20%), Postives = 125/216 (57.87%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F DP +Q D+K  PF V    D  P +   Y GET+ F P ++  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ +T   E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   76 RKFGDPVVQSDMKHWPFRVINDGDK-PKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGER---NVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSL 287          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_YEAST5.882e-4041.20Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP75_SCHPO7.682e-4040.09Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP72_YEAST7.682e-4041.20Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP71_CANFA1.003e-3941.20Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HSP7A_CAEEL1.310e-3938.43Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP71_PONAB1.310e-3941.20Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.310e-3941.20Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_PYRSA1.310e-3938.25Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HS71B_BOVIN1.310e-3941.20Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71A_BOVIN1.310e-3941.20Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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