CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_BACLD (Chaperone protein dnaK OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaK PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = 1
Query:  109 ETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            E + +TP +V  ++L +LK+ AES L   V    I +P YF D +R+A  DA  IAGL   R+ +E TA ALAYG+ KT   E DQ  +   D+G  +  V I     G  ++   + D  +GG DFD+V+  H  ++FK+E  ID+S++  A  RL+ A EK KK LS
Sbjct:   80 EGKKYTPQEVSAIILQHLKSYAESYLGETVSKAVITVPAYFNDAERQATKDAGKIAGLEVERIINEPTAAALAYGLDKT---EEDQ-TILVYDLGGGTFDVSILELGDGVFEVRSTAGDNRLGGDDFDQVIIDHLVSEFKKENGIDLSKDKMALQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_BACHD (Chaperone protein dnaK OS=Bacillus halodurans GN=dnaK PE=2 SV=3)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 69/169 (40.83%), Postives = 96/169 (56.80%), Query Frame = 1
Query:  109 ETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            E + +TP ++  ++L  LK+ AE+ L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ K    E+DQ  +   D+G  +  V I     G  ++   S D  +GG DFD+V+  H  A+FK+E  ID+SQ+  A  RL+ A EK KK LS
Sbjct:   80 EGKEYTPQEISAIILQKLKSDAEAYLGEEVTKAVITVPAYFNDSQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDK----EDDQ-TILVYDLGGGTFDVSILELGDGFFEVKATSGDNKLGGDDFDQVIIDHLIAEFKKENGIDLSQDKMAMQRLKDAAEKAKKDLS 243          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_ACIAC (Chaperone protein dnaK OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.406e-25
Identity = 69/217 (31.80%), Postives = 112/217 (51.61%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F + E+Q+D+  +P+ + +  +G   +  R         P Q+   +L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALA+G+   D  E     +A  D+G  +  V I        + Q ++L  + D  +GG DFD+ +  +  A+FK+E  +D+S++  A  RL+ A EK K  LS++    +N+
Sbjct:   75 RKFEEKEVQKDIDLMPYTIAKADNGDAWVEVR----GNKLAPPQISAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAFGL---DKQEKGDRKIAVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYIIAEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSSAATDINL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_VARPS (Chaperone protein dnaK OS=Variovorax paradoxus (strain S110) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 68/217 (31.34%), Postives = 113/217 (52.07%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F + E+Q+D+  +P+ + +  +G   +  R     +   P QV   +L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALA+G+ K D  +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD+ +  +  A+FK+E  +D+ ++  A  RL+ A EK K  LS + +  +N+
Sbjct:   75 RKFEEKEVQKDIDLMPYTIAKADNGDAWVEVR----GKKIAPQQVSADILRKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLDVKRIINEPTAAALAFGLDKQDKADR---KIAVYDLGGGTFDISIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYIIAEFKKEQGVDLGKDVLALQRLKEAAEKAKIELSNSAQTDINL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRZT (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRZP (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain P1031) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRZJ (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain JJA) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRR6 (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRPS (Chaperone protein dnaK OS=Streptococcus pneumoniae (strain CGSP14) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_STRPN (Chaperone protein dnaK OS=Streptococcus pneumoniae GN=dnaK PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 67/165 (40.61%), Postives = 89/165 (53.94%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L  LK  AE  L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + D  +GG DFD+ +  H  A+FK+E  ID+S +  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQYLKGYAEDYLGEKVTKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKEE----KILVFDLGGGTFDVSILELGDGVFDVLSTAGDNKLGGDDFDQKIIDHLVAEFKKENGIDLSTDKMAMQRLKDAAEKAKKDLS 244          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_BACLD1.406e-2540.24Chaperone protein dnaK OS=Bacillus licheniformis (... [more]
DNAK_BACHD1.406e-2540.83Chaperone protein dnaK OS=Bacillus halodurans GN=d... [more]
DNAK_ACIAC1.406e-2531.80Chaperone protein dnaK OS=Acidovorax avenae subsp.... [more]
DNAK_VARPS1.837e-2531.34Chaperone protein dnaK OS=Variovorax paradoxus (st... [more]
DNAK_STRZT1.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZP1.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRZJ1.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRR61.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPS1.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]
DNAK_STRPN1.837e-2540.61Chaperone protein dnaK OS=Streptococcus pneumoniae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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