CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_LACLS (Chaperone protein dnaK OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L NLKA AES L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + +  +GG DFD+ +     A+FK+E  ID+ Q+  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQNLKATAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKDE----KILVFDLGGGTFDVSILELGDGVFDVLATAGNNKLGGDDFDQKIIDWMVAEFKKENGIDLGQDKMALQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_LACLM (Chaperone protein dnaK OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLS 615
            +TP ++  M+L NLKA AES L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ KTD  E     +   D+G  +  V I     G   +L  + +  +GG DFD+ +     A+FK+E  ID+ Q+  A  RL+ A EK KK LS
Sbjct:   84 YTPQEISAMILQNLKATAESYLGEKVEKAVITVPAYFNDAQRQATKDAGKIAGLEVERIVNEPTAAALAYGLDKTDKDE----KILVFDLGGGTFDVSILELGDGVFDVLATAGNNKLGGDDFDQKIIDWMVAEFKKENGIDLGQDKMALQRLKDAAEKAKKDLS 244          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_LACBA (Chaperone protein dnaK OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 69/174 (39.66%), Postives = 94/174 (54.02%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            +TP QV  M+L +LKA AE  +   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ K D  E     V   D+G  +  V +     G   +L  + D  +GG DFD+ +     A FKEE  +D+S++  A  RL+ A EK KK LS   EA +++
Sbjct:   87 YTPQQVSAMILQHLKAFAEDYIGDTVEKAVITVPAYFNDAQRQATKDAGKIAGLSVERIINEPTAAALAYGLDKQDKDE----KVLVYDLGGGTFDVSVLELGDGVFDVLSTNGDTHLGGDDFDQKIMDWLVAGFKEENGVDLSKDKMALQRLKDAAEKAKKDLSGVTEAQISL 256          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_DESMR (Chaperone protein dnaK OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 70/213 (32.86%), Postives = 112/213 (52.58%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R++  PE++  L+  P+ + EG  G   +      E + ++P ++  ++L  LK  AE+ L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA +LAYG    D   N++  +A  D+G  +  + I       +++   + D  +GG DFD  +  +   +FK+E  ID+SQ+  A  RL+ A EK KK LS   E  +N+
Sbjct:   73 RRYDAPEVKHWLEHCPYKIVEGQGGDAYVEV----EGKKYSPAEISAIILGKLKKDAEAYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAASLAYGF---DKKANEK--IAVFDLGGGTFDISILEVGDNVVEVRATNGDTFLGGEDFDHRVISYLVDEFKKENGIDLSQDRMALQRLKEAGEKAKKELSTAMETEVNL 276          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB8 (Chaperone protein dnaK OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 66/174 (37.93%), Postives = 96/174 (55.17%), Query Frame = 1
Query:  121 FTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            ++P ++  M+L  +KA AES L   V    I +P YF D QR+A  DA  IAGL  LR+ +E TA +LAYG+ KTD        +   D+G  +  V I     G  ++L  + D  +GG DFDE + ++ A +FK    ID+ Q+  A  RL+ A EK K  LSA+ +  +N+
Sbjct:   86 YSPQEISAMVLQKIKADAESYLGETVTQAVITVPAYFNDSQRQATKDAGKIAGLEVLRIINEPTAASLAYGLDKTDSAH----KILVYDLGGGTFDVSILDLGDGVFEVLSTNGDTKLGGDDFDEKIMKYIADEFKASNGIDLMQDKMAVQRLKEASEKAKIELSASQQTNINL 255          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_BURS3 (Chaperone protein dnaK OS=Burkholderia sp. (strain 383) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 71/217 (32.72%), Postives = 114/217 (52.53%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F + E+Q+D+  +P+ + +  +G   + A   GE     P QV   +L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALA+G+   D  E     +A  D+G  +  V I        + Q ++L  + D  +GG DFD+ +  +   +FK+E  +D+S++  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFEEKEVQKDIGLMPYTIVKADNGDAWVEAH--GEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL---DKVEKGDRKIAVYDLGGGTFDVSIIEIADVDGEMQFEVLSTNGDTFLGGEDFDQRIIDYIIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSSQQTEINL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_BURM1 (Chaperone protein dnaK OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 69/217 (31.80%), Postives = 114/217 (52.53%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F + E+Q+D+  +P+++ +  +G   + A      +   P QV   +L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALA+G+   D  E     +A  D+G  +  V I        + Q ++L  + D  +GG DFD+ +  +   +FK+E  +D+S++  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFEEKEVQKDIGLMPYSIIKADNGDAWVEAH----GQKLAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL---DKAEKGDRKIAVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYIIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSSQQTEINL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_BURCJ (Chaperone protein dnaK OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 71/217 (32.72%), Postives = 114/217 (52.53%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F + E+Q+D+  +P+++ +  +G   + A   GE     P QV   +L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALA+G+   D  E     +A  D+G  +  V I        + Q ++L  + D  +GG DFD+ +  +   +FK+E  +D+S++  A  RL+ A EK K  LS+  +  +N+
Sbjct:   75 RRFEEKEVQKDIGLMPYSIIKADNGDAWVEAH--GEK--LAPPQVSAEVLRKMKKTAEDYLGEPVTEAVITVPAYFNDSQRQATKDAGRIAGLEVKRIINEPTAAALAFGL---DKAEKGDRKIAVYDLGGGTFDVSIIEIADVDGEMQFEVLSTNGDTFLGGEDFDQRIIDYIIGEFKKEQGVDLSKDVLALQRLKEAAEKAKIELSSGQQTEINL 284          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_ANOFW (Chaperone protein dnaK OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25
Identity = 70/192 (36.46%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  109 ETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVL-------------SANPEAPLNIE 645
            E + +TP Q+  M+L  LK+ AE+ L   V    I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ K D    +   +   D+G  +  V I     G  ++   + D  +GG DFD+V+  +   +FK+E+ ID+S++  A  RL+ A EK KK L             SAN   PL++E
Sbjct:   80 EGKEYTPQQISAMILQYLKSYAEAYLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKMD----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVEEFKKEHGIDLSKDKMALQRLKDAAEKAKKELSGVMQTQISLPFISANENGPLHLE 267          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS7C5_DICDI (Heat shock 70-related protein 5 OS=Dictyostelium discoideum GN=DDB_G0285709 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 70/224 (31.25%), Postives = 114/224 (50.89%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIH--ARYLGETRVFTPTQVLGMLLSNLKAIAESNLNA-AVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTD-----LPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+ +D     ++K L F VT   D    I     Y       TP ++   +L  +K  AE+ +   ++    I +P  FT+ QR  + +AAT AG+  +R+ HE +A ALAYG  +         E+ + NV   D+G + +   +   +    +++G+  D +V G  FD VL QHF  +F  +Y+ D++ NAR+  +L+ ACEK K+ LS   +A L I+ L
Sbjct:   76 RKTTDELFDHEVKKLSFKVTTYEDNNEKIEFQVNYKSNVVTLTPIEIATSILEQIKHTAETFIGGESIKKAVISVPTDFTEKQRNDLKEAATAAGITVVRMIHEHSAVALAYGYDQVKECSETTNESKESNVMVFDLGGSGVSASMIRVRSKLFEMIGNVSDHTVSGEHFDHVLVQHFTQEFNRKYRCDLTDNARSKAKLKSACEKAKRNLSNMTQAALEIDSL 299          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LACLS1.837e-2541.21Chaperone protein dnaK OS=Lactococcus lactis subsp... [more]
DNAK_LACLM1.837e-2541.21Chaperone protein dnaK OS=Lactococcus lactis subsp... [more]
DNAK_LACBA1.837e-2539.66Chaperone protein dnaK OS=Lactobacillus brevis (st... [more]
DNAK_DESMR1.837e-2532.86Chaperone protein dnaK OS=Desulfovibrio magneticus... [more]
DNAK_CLOB81.837e-2537.93Chaperone protein dnaK OS=Clostridium beijerinckii... [more]
DNAK_BURS31.837e-2532.72Chaperone protein dnaK OS=Burkholderia sp. (strain... [more]
DNAK_BURM11.837e-2531.80Chaperone protein dnaK OS=Burkholderia multivorans... [more]
DNAK_BURCJ1.837e-2532.72Chaperone protein dnaK OS=Burkholderia cepacia (st... [more]
DNAK_ANOFW1.837e-2536.46Chaperone protein dnaK OS=Anoxybacillus flavitherm... [more]
HS7C5_DICDI2.399e-2531.25Heat shock 70-related protein 5 OS=Dictyostelium d... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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