CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig295 contig Csv1_Contig295:433..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_LACSN (Chaperone protein dnaK OS=Lactobacillus sanfranciscensis GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 70/213 (32.86%), Postives = 111/213 (52.11%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            ++ ++P   R +KS       G +GY +       + + +TP Q+  M+L  +K  AE  L   V +  I +P YF D QR+A  DA  IAGL   R+ +E TA ALAYG+ K D  E     +   D+G  +  V +     G  ++L  + D  +GG DFD+ +  +  A+FK+E  +D++Q+  A  RL+ A EK KK LS   +  +++
Sbjct:   58 QEITNPNTVRSIKS-----HMGEEGYTVDI-----DGKKYTPQQISAMILQYIKGYAEDYLGDTVSEAVITVPAYFNDAQRQATKDAGKIAGLDVKRIINEPTAAALAYGLDKQDKDE----KILVYDLGGGTFDVSVLELGDGVFQVLSTNGDTHLGGDDFDQRIIDYLVAEFKKENGVDLAQDKMALQRLKDAAEKAKKELSGVNQTEISL 256          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_DESPS (Chaperone protein dnaK OS=Desulfotalea psychrophila GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 70/213 (32.86%), Postives = 104/213 (48.83%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F+D E+QR  +  PF + EG  G   I      E   + P ++  M+L  +K  AE  L   V +  + +P YF D QR+A  DA  IAGL   R+ +E TA +LAYG     L +  +  +A  D+G  +  V +     G  ++   + D  +GG DFD  +    A +FK E  ID+  +  A  RL+   EK K  LS   E  +N+
Sbjct:   75 RKFTDAEVQRSQEVSPFDIVEGISGSVAIQV----EGHKYRPAEISAMVLGKMKQTAEEYLGEEVTEAVVTVPAYFNDSQRQATKDAGKIAGLDVKRIINEPTAASLAYG-----LDKKVEEKIAVFDLGGGTFDVSVLEIGDGVFEVKSTNGDTFLGGEDFDMRIVHWLADEFKREQGIDLRSDKMALQRLKEEAEKAKMELSTTVETDINL 278          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSC (Chaperone protein dnaK OS=Dehalococcoides sp. (strain CBDB1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/206 (33.50%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   25 LQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            ++ D K  P+ V +G +       R +   + F+P +V  M+L  LK+ AE+ L   V +  I +P YF D QR+A  DA  IAGL  LR+ +E TA ALAYG+ K    + D+  +A  D+G  +  + I    +G  ++   + D  +GG DFD+ +     A++K++  ID+S++  A  RL+ A EK K  LS   +  +N+
Sbjct:   87 VEADAKRKPYKVIQGNNN----EVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIAGLKVLRIINEPTAAALAYGLDK----KKDE-TIAVYDLGGGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKIIDWLIAEYKKDQGIDLSKDKTALQRLKEAAEKAKIELSTVQQTEINL 283          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_DEHSB (Chaperone protein dnaK OS=Dehalococcoides sp. (strain BAV1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/206 (33.50%), Postives = 111/206 (53.88%), Query Frame = 1
Query:   25 LQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            ++ D K  P+ V +G +       R +   + F+P +V  M+L  LK+ AE+ L   V +  I +P YF D QR+A  DA  IAGL  LR+ +E TA ALAYG+ K    + D+  +A  D+G  +  + I    +G  ++   + D  +GG DFD+ +     A++K++  ID+S++  A  RL+ A EK K  LS   +  +N+
Sbjct:   87 VEADAKRKPYKVIQGNNN----EVRVVMGDKDFSPPEVSAMILQKLKSDAEAYLGEKVTEAVITVPAYFNDAQRQATKDAGAIAGLKVLRIINEPTAAALAYGLDK----KKDE-TIAVYDLGGGTFDISILELGEGTFQVKSTAGDTHLGGDDFDQKIIDWLIAEYKKDQGIDLSKDKTALQRLKEAAEKAKIELSTVQQTEINL 283          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_COXBU (Chaperone protein dnaK OS=Coxiella burnetii GN=dnaK PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYL-GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F D  +Q+D+K +P+ + +  +G   +  +   G+++   P Q+   +L  +K  AE  L   V D  I +P YF D QR+A  DA  IAGL+  R+ +E TA ALAYG+ K    +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD  L  + A +FK++  +D+  +  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDK----KKGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_COXBR (Chaperone protein dnaK OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYL-GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F D  +Q+D+K +P+ + +  +G   +  +   G+++   P Q+   +L  +K  AE  L   V D  I +P YF D QR+A  DA  IAGL+  R+ +E TA ALAYG+ K    +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD  L  + A +FK++  +D+  +  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDK----KKGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_COXBN (Chaperone protein dnaK OS=Coxiella burnetii (strain Dugway 5J108-111) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYL-GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F D  +Q+D+K +P+ + +  +G   +  +   G+++   P Q+   +L  +K  AE  L   V D  I +P YF D QR+A  DA  IAGL+  R+ +E TA ALAYG+ K    +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD  L  + A +FK++  +D+  +  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDK----KKGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_COXB2 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuG_Q212) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYL-GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F D  +Q+D+K +P+ + +  +G   +  +   G+++   P Q+   +L  +K  AE  L   V D  I +P YF D QR+A  DA  IAGL+  R+ +E TA ALAYG+ K    +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD  L  + A +FK++  +D+  +  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDK----KKGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_COXB1 (Chaperone protein dnaK OS=Coxiella burnetii (strain CbuK_Q154) GN=dnaK PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 69/218 (31.65%), Postives = 115/218 (52.75%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYL-GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNI 642
            R+F D  +Q+D+K +P+ + +  +G   +  +   G+++   P Q+   +L  +K  AE  L   V D  I +P YF D QR+A  DA  IAGL+  R+ +E TA ALAYG+ K    +     +A  D+G  +  + I        + Q ++L  + D  +GG DFD  L  + A +FK++  +D+  +  A  RL+ A EK K  LS++ +  +N+
Sbjct:   75 RRFDDNVVQKDIKMVPYKIIKADNGDAWVEVKDKEGKSQKLAPPQISAQVLIKMKKTAEDYLGHEVKDAVITVPAYFNDSQRQATKDAGKIAGLNVKRIINEPTAAALAYGMDK----KKGDRKIAVYDLGGGTFDISIIEIAEVDGEHQFEVLATNGDTFLGGEDFDLRLIDYLAGEFKKDEGVDLHNDPLALQRLKEAAEKAKIELSSSQQTDVNL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: DNAK_CHLMU (Chaperone protein dnaK OS=Chlamydia muridarum GN=dnaK PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 6.980e-25
Identity = 72/212 (33.96%), Postives = 111/212 (52.36%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLN 639
            R+FS  E++ ++K++P+ V     G  +       E +++TP ++   +L  +K  AE+ L   V +  I +P YF D QR +  DA  IAGL   R+  E TA ALAYGI K    E D+  +A  D+G  +  + I     G  ++L  + D  +GG DFDEV+      +FK++  ID+S++  A  RL+ A EK K  LS      +N
Sbjct:   80 RKFS--EVESEIKTVPYKVAPNSKGDAVFEV----ENKLYTPEEIGAQILMKMKETAEAYLGETVTEAVITVPAYFNDSQRASTKDAGRIAGLDVKRIIPEPTAAALAYGIDK----EGDK-KIAVFDLGGGTFDISILEIGDGVFEVLSTNGDTHLGGDDFDEVIINWMLGEFKKQEGIDLSKDNMALQRLKDAAEKAKIELSGVSSTEIN 280          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAK_LACSN6.980e-2532.86Chaperone protein dnaK OS=Lactobacillus sanfrancis... [more]
DNAK_DESPS6.980e-2532.86Chaperone protein dnaK OS=Desulfotalea psychrophil... [more]
DNAK_DEHSC6.980e-2533.50Chaperone protein dnaK OS=Dehalococcoides sp. (str... [more]
DNAK_DEHSB6.980e-2533.50Chaperone protein dnaK OS=Dehalococcoides sp. (str... [more]
DNAK_COXBU6.980e-2531.65Chaperone protein dnaK OS=Coxiella burnetii GN=dna... [more]
DNAK_COXBR6.980e-2531.65Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXBN6.980e-2531.65Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXB26.980e-2531.65Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_COXB16.980e-2531.65Chaperone protein dnaK OS=Coxiella burnetii (strai... [more]
DNAK_CHLMU6.980e-2533.96Chaperone protein dnaK OS=Chlamydia muridarum GN=d... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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