CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig295 contig Csv1_Contig295:433..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 86/217 (39.63%), Postives = 127/217 (58.53%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F +P +Q D+K  PF  V+EG  G P I   Y GE + F P ++  M+L  +K IAE+ L   V +  I +P YF D QR+A  DA  IAGL+  R+ +E TA A+AYG+   D  ++ + NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   78 RRFDEPVVQADMKHWPFKVVSEG--GKPKIQVDYKGENKTFFPEEISSMVLVKMKEIAEAYLGHKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVQRIINEPTAAAIAYGL---DKGKSGERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.092e-37
Identity = 88/217 (40.55%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAV-TEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DP +Q D+K  PF V  EG  G P +   Y GE + F P ++  M+L+ +K  AE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ K    E    +V   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   78 RKFNDPVVQSDMKLWPFQVINEG--GKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKAGQGER---HVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7D_DROME (Heat shock 70 kDa protein cognate 4 OS=Drosophila melanogaster GN=Hsc70-4 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 85/216 (39.35%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF V    DG P I   Y  E + F P ++  M+L+ +K  AE+ L   V +  I +P YF D QR+A  DA TIAGL+ LR+ +E TA A+AYG+ K  + E    NV   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D++ N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RKFDDAAVQSDMKHWPFEVVSA-DGKPKIEVTYKDEKKTFFPEEISSMVLTKMKETAEAYLGKTVTNAVITVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKAVGER---NVLIFDLGGGTFDVSILSIDDGIFEVKSTAGDTHLGGEDFDNRLVTHFVQEFKRKHKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 85/217 (39.17%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF  V+EG  G P +   Y GET+ F P ++  M+L+ +K IAE+ L   V    I +P YF D QR+A  DA TI GL+ LR+ +E TA A+AYG+ K      ++ NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  H A +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   77 RKFEDATVQSDMKHWPFRVVSEG--GKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEK-NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 83/216 (38.43%), Postives = 121/216 (56.02%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D E+Q D+K  PF V +     P+I   Y GET+ F+P ++  M+L  +K  AE  L   V D  + +P YF D QR+A  DA TIAGL+ +R+ +E TA A+AYG+ K    E    NV   D+G  +  V +   + G  ++   + D  +GG DFD  L   F  +FK + K D+S N RA  RLR ACE+ K+ LS++ +  + I+ L
Sbjct:   74 RKFDDHEVQGDIKHFPFKVVDKASK-PMIQVEYKGETKTFSPEEISSMILGKMKETAEGFLGTTVKDAVVTVPAYFNDSQRQATKDAGTIAGLNVMRIINEPTAAAIAYGLDKKSEAEK---NVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNFFIQEFKRKNKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_SOYBN (Heat shock 70 kDa protein OS=Glycine max GN=HSP70 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 82/216 (37.96%), Postives = 126/216 (58.33%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+FSD  +Q D+K  PF V   P   P+I   Y GE + F+  ++  M+L  ++ +AE+ L  AV +  + +P YF D QR+A  DA  I+GL+ LR+ +E TA A+AYG+ K    + +Q NV   D+G  +  V I   ++G  ++   + D  +GG DFD  +  HF ++FK + K D+S NARA  RLR ACE+ K+ LS+  +  + I+ L
Sbjct:   78 RRFSDSSVQNDMKLWPFKVGGSPCDKPMIVVNYKGEEKKFSAEEISSMVLVKMREVAEAFLGHAVKNAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGLDKKASRKGEQ-NVLIFDLGGGTFDVSILTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVSEFKRKNKKDISGNARALRRLRTACERAKRTLSSTAQTTIEIDSL 292          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS7C4_DICDI (Heat shock cognate 70 kDa protein 4 OS=Dictyostelium discoideum GN=DDB_G0293678 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 84/217 (38.71%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGP-DGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R++SD  +Q D+K  PF V     D  PLI   + GET+ F+P ++  M+LS +K I E +L   V D  I +P YF D QR A   A TI+ L+ LR+ +E TATA+AYG+++  +   D + V  +D+G  +  V +   + G  +IL    D  +GG DF+  L  HF  +FK ++K D++ N RA  RLR ACE+ K+ LS +  A + I+ L
Sbjct:   74 RKYSDSVVQSDMKLWPFKVIANKFDDKPLIQVDFKGETKTFSPEEISSMVLSKMKEIVEQHLGEPVTDAVITVPAYFNDRQRHATKYAGTISNLNVLRIINEPTATAIAYGLHRRGI---DDMKVLIIDLGGGTFDVSLFNIEDGIYEILLSGGDNHLGGADFNNRLMNHFIDEFKLKHKKDITNNQRAIFRLRTACERAKRTLSISSLASIEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 89/217 (41.01%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAV-TEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DP +Q D+K  PF V  EG  G P +   Y GE + F P ++  M+L+ LK  AE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ K    E    +V   D+G  +  V I     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   78 RKFNDPVVQADMKLWPFQVINEG--GKPKVLVSYKGENKAFYPEEISSMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKGGQGER---HVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.732e-37
Identity = 87/217 (40.09%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAV-TEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DP +Q D+K  PF V  EG  G P +   Y GE + F P ++  M+L+ +K  AE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+ K    E    +V   D+G  +  V +     G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A L I+ L
Sbjct:   78 RKFNDPVVQSDMKLWPFQVINEG--GKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGYTVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDKAGQGER---HVLIFDLGGGTFDVSVLTIDDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQANLEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.568e-37
Identity = 85/216 (39.35%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+   PF V    +  P +   Y GET+ F P +V  M+L+ +K IAE+ L   V +  I +P YF D QR+A  DA TI+GL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  HF A+FK +YK D+S N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RRFDDHVVQSDMNDWPFNVIND-NTRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL---DKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKYKKDISDNKRAVRRLRSACERAKRTLSSSTQASIEIDSL 287          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_ORYLA2.092e-3739.63Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HS71L_PIG2.092e-3740.55Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HSP7D_DROME2.732e-3739.35Heat shock 70 kDa protein cognate 4 OS=Drosophila ... [more]
HSP72_HUMAN2.732e-3739.17Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP72_CANAL2.732e-3738.43Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_SOYBN2.732e-3737.96Heat shock 70 kDa protein OS=Glycine max GN=HSP70 ... [more]
HS7C4_DICDI2.732e-3738.71Heat shock cognate 70 kDa protein 4 OS=Dictyosteli... [more]
HS71L_HUMAN2.732e-3741.01Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HS71L_BOVIN2.732e-3740.09Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP7C_ORYLA3.568e-3739.35Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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