CN188146

Overview
NameCN188146
Unique NameCN188146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 84/216 (38.89%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF V     G P I   Y GE + F P +V  M+L+ +K  AE+ L   V +  I +P YF D QR+A  DA TI+GL+ LR+ +E TA A+AYG+   D   + + NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  HF  +FK +YK D++ N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   76 RKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL---DKKGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 86/217 (39.63%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQL-KILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R++ DP++  D+K  PF V     G P I   Y GE++ F P ++  M+L+ +K  AE+ L  ++ D  I +P YF D QR+A  DA  IAGL+ LR+ +E TA ALAYG+   D    D+ NV   D+G  +  V I    +G L ++   + D  +GG DFD  L  H A +FK +YK D+  N RA  RLR A E+ K+ LS++ EA + I+ L
Sbjct:   73 RKYDDPKIAEDMKHWPFKVVSD-GGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGL---DKNLKDERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDAL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 84/217 (38.71%), Postives = 125/217 (57.60%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF  V+EG  G P +   Y GE + F P ++  M+L+ +K IAE+ L   V    I +P YF D QR+A  DA TI GL+ LR+ +E TA A+AYG+ K      ++ NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  H A +FK ++K D++ N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   77 RKFEDATVQSDMKHWPFRVVSEG--GKPKVQVEYKGEIKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEK-NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 84/216 (38.89%), Postives = 124/216 (57.41%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+D  +Q D+K  PF V     G P +   Y GE + F P ++  M+L  ++ IAE+ L   V +  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D   + + NV   D+G  +  V I   + G  ++   + D  +GG DFD  L  HF  +FK ++K D+SQN RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   78 RKFNDQVVQADMKHWPFKVVSD-GGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGM---DKGMSRERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRALRRLRTACERAKRTLSSSSQASIEIDSL 289          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 87/217 (40.09%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGY-PLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DP +  D K  PF V +  DG  P I   + GET+ F P ++  M+L  ++ IA++ L   V D  I +P YF D QR+A  DA  IAGL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V I   + G  +I   + D  +GG DFD  L  HF  +FK ++K D+S N RA  RLR ACE+ K+ LSA+ +A + I+ L
Sbjct:   76 RKFNDPSVTSDRKHWPFNVID--DGSRPKIQVEFKGETKSFYPEEISSMVLLKMEEIADAYLGKKVTDVVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGL---DKKVGTEKNVLIFDLGGGTFDVSILAIEDGIFEIKSTAGDTHLGGEDFDNRLVNHFVDEFKRKHKKDISSNKRALRRLRTACERAKRTLSASTQASVEIDSL 287          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 7.949e-37
Identity = 84/216 (38.89%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF V     G P +   Y GET+ FTP ++  M+L  +K  AE+ L  AV D  I +P YF D QR+A  D+  IAGL+ LR+ +E TA A+AYG+   D   + + NV   D+G  +  V I   + G  ++   + D  + G DFD  +  HF A+FK   K D++ N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   75 RKFDDGSVQSDMKHWPFKVVNAGGGKPKVQVEYKGETKTFTPEEISSMVLVKMKETAEAFLGHAVKDAVITVPAYFNDSQRQATKDSGAIAGLNVLRIINEPTAAAIAYGL---DKKGHGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHL-GEDFDNRMVNHFVAEFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSL 286          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 82/216 (37.96%), Postives = 122/216 (56.48%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D E+Q D+K  PF VT    G P I   Y GE + FTP ++  M+L  ++  AE+ L   V D  + +P YF D QR+A  DA  I+GL+ +R+ +E TA A+AYG+   D     + NV   D+G  +  V +   ++G  ++   + D  +GG DFD  L  HF  +FK + K D++ NARA  RLR ACE+ K+ LS+  +  + I+ L
Sbjct:   74 RKFDDAEVQSDMKHWPFEVTS-VGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQRQATKDAGIISGLNVMRIINEPTAAAIAYGL---DKKTEGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVQEFKRKNKKDLTTNARALRRLRTACERAKRTLSSAAQTTIEIDSL 285          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 84/217 (38.71%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF  V+EG  G P +   Y GE + F P ++  M+L+ +K IAE+ L   V    I +P YF D QR+A  DA TI GL+ LR+ +E TA A+AYG+ K      ++ NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  H A +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   77 RKFEDATVQSDMKHWPFRVVSEG--GKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEK-NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.038e-36
Identity = 82/216 (37.96%), Postives = 123/216 (56.94%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F+DP +Q DLK  PF V    +G P +   Y GE + F P ++  M+L+ +K  AE+ L   V +  I +P YF D QR+A  DA  +AGL+ LR+ +E TA A+AYG+   D     + NV   D+G  +  V I     G  ++   + D  +GG DFD  +  HF  +FK ++K D+ QN RA  RLR AC++ K+ LS++ +A + I+ L
Sbjct:   77 RKFNDPVVQCDLKHWPFQVVSD-EGKPKVKVEYKGEEKSFFPEEISSMVLTKMKETAEAYLGHPVTNAVITVPAYFNDSQRQATKDAGVLAGLNILRIINEPTAAAIAYGL---DKGARGEQNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRMVNHFVEEFKRKHKKDIGQNKRALRRLRTACDRAKRTLSSSSQASIEIDSL 288          
BLAST of CN188146 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.356e-36
Identity = 84/217 (38.71%), Postives = 124/217 (57.14%), Query Frame = 1
Query:    4 RQFSDPELQRDLKSLPF-AVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECL 651
            R+F D  +Q D+K  PF  V+EG  G P +   Y GE + F P ++  M+L+ +K IAE+ L   V    I +P YF D QR+A  DA TI GL+ LR+ +E TA A+AYG+ K      ++ NV   D+G  +  V I   + G  ++   + D  +GG DFD  +  H A +FK ++K D+  N RA  RLR ACE+ K+ LS++ +A + I+ L
Sbjct:   77 RKFEDATVQSDMKHWPFRVVSEG--GKPKVQVEYKGEMKTFFPEEISSMVLTKMKEIAEAYLGGKVQSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEK-NVLIFDLGGGTFDVSILTIEDGIFELKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSL 290          
The following BLAST results are available for this feature:
BLAST of CN188146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP7D_MANSE7.949e-3738.89Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP74_DROME7.949e-3739.63Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP72_CAPHI7.949e-3738.71Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP70_ONCTS7.949e-3738.89Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HSP70_HYDMA7.949e-3740.09Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_BRUMA7.949e-3738.89Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP72_USTMA1.038e-3637.96Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP72_RAT1.038e-3638.71Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP70_XENLA1.038e-3637.96Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP72_MOUSE1.356e-3638.71Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005J04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005J04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188146 ID=CN188146; Name=CN188146; organism=Citrus sinensis; type=EST; length=654bp
AGTCGACAATTCTCTGATCCTGAGCTGCAAAGGGATCTTAAGTCACTGCC
TTTTGCTGTAACTGAAGGTCCTGATGGTTACCCTTTAATACATGCACGAT
ATTTGGGTGAAACAAGAGTGTTTACTCCAACCCAAGTTTTGGGTATGTTG
CTCTCAAATTTAAAAGCCATAGCTGAGAGTAATTTGAATGCAGCAGTTGT
GGACTGCTGCATTGGAATTCCTGTTTATTTCACTGATCTCCAAAGAAGAG
CTGTTATAGATGCAGCCACAATTGCAGGATTGCATCCGCTTCGTTTGTTT
CATGAAACTACAGCCACAGCATTGGCTTATGGTATTTATAAGACAGATCT
ACCAGAAAATGACCAATTAAATGTTGCGTTTGTTGACATTGGGCATGCAA
GCTTGCAAGTATGCATAGCTGGTTTCAAGAAGGGTCAACTTAAGATATTG
GGTCATTCCTTTGATCGATCCGTGGGTGGTAGAGATTTTGATGAAGTTCT
ATTCCAGCATTTTGCAGCTAAGTTCAAGGAAGAGTACAAGATTGATGTCT
CCCAAAATGCTAGGGCTTCCCTCAGGTTGAGGGTTGCTTGTGAGAAACTG
AAGAAGGTTCTCAGTGCTAATCCCGAGGCACCTTTGAATATTGAATGCTT
AATG
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