CK939327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 55/145 (37.93%), Postives = 80/145 (55.17%), Query Frame = 3 Query: 9 ARKRLMRDFKRLQQDPPAGISGAPQDN-----SIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 422 A RL ++ K ++D P G P N ++M W I G TPW+GG FKL + F +DYP+ PP +F +FHPN+Y G++CL IL+ W P + + IQ LL +PN PA +EA ++ +N+ EY +R R Sbjct: 5 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSGTVCLSILEEDKDWRPAITINQLFIGIQELLNEPNIQEPAQAEAYTIYCQNRVEYEKRFR 149
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 21 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 440 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 21 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 440 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 21 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 440 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 4.267e-25 Identity = 57/155 (36.77%), Postives = 90/155 (58.06%), Query Frame = 3 Query: 21 LMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKR-EYNRRVREIVEQS 440 L R L ++P G S G DN + W +I GP DT ++GG FK L F +DYP +PP ++F++ ++HPN+ +G +C+ IL + +W PI+ V I+ S+ S+L DPN +SPAN +AA+ + E++ E+ R+V V +S Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKS 164
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2C_XENLA (Ubiquitin-conjugating enzyme E2 C OS=Xenopus laevis GN=ube2c PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 56/137 (40.88%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 425 KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+FV+ FHPN+ + G+ICLDIL+++WS +YDV IL S+QSLL +PN SP N AA ++ +N+ Y + + E Sbjct: 33 KRLQQELMTLMMSGDKGISAFPESDNLFKWIGTIDGAVGTVYEDLRYKLSLEFPSGYPYNAPTVKFVTPCFHPNVDSHGNICLDILKDKWSALYDVRTILLSLQSLLGEPNNESPLNPYAAELW-QNQTAYKKHLHE 168
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2C_BOVIN (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus GN=UBE2C PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 6 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 425 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 5.573e-25 Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 422 KR+ ++ + DPP S P+ +++ W + I GP + ++GG F L + F+ +YP KPP V F +R++H NI + G ICLDIL++ WSP ++ +L SI SLL D NP P A + +N+ E++R R Sbjct: 89 KRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTFRTRIYHCNINSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYLQNREEHDRIAR 224
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC31_ARATH (Probable ubiquitin carrier protein E2 31 OS=Arabidopsis thaliana GN=UBC31 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 7.279e-25 Identity = 51/113 (45.13%), Postives = 76/113 (67.26%), Query Frame = 3 Query: 87 NSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 425 N+I W AVI GPD TP++GG F L+++F DYP KPP F + ++HPNI +GSIC++IL+++W+P V +L SI LL PNP+ P E ++F N+ ++++R RE Sbjct: 34 NNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICMNILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLFKNNRFQFDQRARE 146
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2C_MOUSE (Ubiquitin-conjugating enzyme E2 C OS=Mus musculus GN=Ube2c PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.242e-24 Identity = 55/140 (39.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 6 PARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 425 P KRL ++ L GIS P+ +++ W I G T ++ +KL+L+F YP PTV+F++ +HPN+ G+ICLDIL+++WS +YDV IL SIQSLL +PN +SP N+ AA ++ +N + + ++E Sbjct: 30 PVGKRLQQELMILMTSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQE 168 The following BLAST results are available for this feature:
BLAST of CK939327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939327 ID=CK939327; Name=CK939327; organism=Citrus sinensis; type=EST; length=523bpback to top |