CK939327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 8.897e-23 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 27 RDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 434 ++ L DPP GI P + + I GP+ TP+ GG F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA R+ EN EY R R + E Sbjct: 18 KEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2S_DROMO (Ubiquitin-conjugating enzyme E2 S OS=Drosophila mojavensis GN=GI11085 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22 Identity = 48/140 (34.29%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 434 +++M++ + ++ PP GI ++ + A+I GP TP+ G F++ L ++D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2R1_MOUSE (Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22 Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 3 Query: 9 ARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENK------REYNRRVREIV 431 ++K L+ + K LQ++P G D + W IFGP +T ++GG FK L+F DYP PP RF+++M+HPNIY G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ M+ + K REY +R+ V Sbjct: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQV 169
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2R1_HUMAN (Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 1.162e-22 Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 3 Query: 9 ARKRLMRDFKRLQQDPPAGISGAPQDNSIML-WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENK------REYNRRVREIV 431 ++K L+ + K LQ++P G D + W IFGP +T ++GG FK L+F DYP PP RF+++M+HPNIY G +C+ IL +W+P +V IL S+ SLL +PN SPAN +A+ M+ + K REY +R+ V Sbjct: 9 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMYRKWKESKGKDREYTDIIRKQV 169
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2S_DROGR (Ubiquitin-conjugating enzyme E2 S OS=Drosophila grimshawi GN=GH12079 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 47/140 (33.57%), Postives = 83/140 (59.29%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 434 +++M++ + ++ PP GI ++ + A+I GP TP+ G F++ L ++D+P PP F++++FHPN+ ++G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 17 RQVMKELQDMESTPPEGIKVLINESDVTDIQALIDGPAGTPYAVGIFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC22_ARATH (Ubiquitin carrier protein E2 22 OS=Arabidopsis thaliana GN=UBC22 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.982e-22 Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 422 K+L ++ K L + PP GI D A I GP TP++ G F++ L + D+P+ PP F++++FHPN+ ++G IC++ L+ W+P + +L+ ++ LL +P P S N +A +M EN EY R R Sbjct: 13 KQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNEQAGKMLLENYDEYARHAR 148
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.589e-22 Identity = 53/140 (37.86%), Postives = 79/140 (56.43%), Query Frame = 3 Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 422 +PA+ RL +D + L+ P ++ DN + +I PD+ + GG F+ T F E YP PP V +++FHPNI G ICL+IL+ WSP D+ I+ + SL +PN N P N EAA + +++K E+ VR Sbjct: 31 SPAKLRLQKDIEELELPPTVRVNIISLDNHKEMSLNIIIIPDEGFYKGGKFRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2S_DROVI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila virilis GN=GJ15767 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.381e-22 Identity = 47/140 (33.57%), Postives = 82/140 (58.57%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 434 +++M++ + ++ PP GI ++ + A I GP TP+ G F++ L ++D+P PP F++++FHPN+ ++G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y++R R + E Sbjct: 17 RQVMKELQDMETTPPEGIKVLINESDVTDIQAFIDGPAGTPYAVGVFRVKLTLSKDFPQTPPKAYFLTKIFHPNVASNGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 3.381e-22 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVE 434 +R+ ++ L DPP GI P + I I GP+ TP+ G F++ L +D+P PP F++++FHPN+ +G IC+++L+ W + +L +I+ LL PNP S N EA R+ EN EY R + + E Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTE 153
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC1_YEAST (Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces cerevisiae GN=UBC1 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 4.416e-22 Identity = 48/135 (35.56%), Postives = 85/135 (62.96%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGIS-GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNR 413 KR+M++ + ++ DP A I+ ++ I GP TP++GG F + ++ +YP KPP ++F ++++HPNI + G+ICLDIL+N WSP+ + + L S+Q+LL P PN P ++E A+ + ++ +N+ Sbjct: 5 KRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNK 139 The following BLAST results are available for this feature:
BLAST of CK939327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939327 ID=CK939327; Name=CK939327; organism=Citrus sinensis; type=EST; length=523bpback to top |