CK939327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC14_SCHPO (Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe GN=ubc14 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 8.328e-21 Identity = 46/142 (32.39%), Postives = 83/142 (58.45%), Query Frame = 3 Query: 15 KRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ-WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 437 +RL +++ L++ P I D+++ W GP D+ + GG F +L+F DYP +PPT+ F +R++HPN ++G++CL IL+ Q + P + ++L I LL +PNP+ P + A + ++ +++ R+ VEQ Sbjct: 10 RRLTKEYSDLREHPIPDIRVNLVDDNLFHWACTALGPSDSVYAGGKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAILKQQVFKPSIKLRSVLEQILQLLREPNPDDPLVASIAEQYRNDRPSFDKIARDYVEQ 151
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC12_YEAST (NEDD8-conjugating enzyme UBC12 OS=Saccharomyces cerevisiae GN=UBC12 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.855e-20 Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 3 Query: 9 ARKRLMRDFKRLQQDPPAGI----SGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVR 422 AR RL RD L P + S D S VI PD+ ++ G+ L F E YP +PP V + ++FHPNI G++CL+IL+ WSP D+ +I+T + L +PNPN P N +AA++ E ++E+ VR Sbjct: 28 ARIRLKRDLDSLDLPPTVTLNVITSPDSADRSQSPKLEVIVRPDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVR 169
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.398e-20 Identity = 48/133 (36.09%), Postives = 79/133 (59.40%), Query Frame = 3 Query: 24 MRDFKRLQQD--------PPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYA-DGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSEN 395 M DF R+Q++ +GI P+ +++ I GP TP++GGTF++ + + YP +PP ++F ++++HPNI + G+ICLDIL++QWSP + L SIQ+LL P P P ++ A + +N Sbjct: 1 MIDFSRIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKN 133
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2H_MOUSE (Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.050e-20 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 117 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 452 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA M+ EY ++++E +++ T + Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE 152
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2H_HUMAN (Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.050e-20 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 117 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 452 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA M+ EY ++++E +++ T + Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE 152
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBE2H_BOVIN (Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.050e-20 Identity = 41/114 (35.96%), Postives = 72/114 (63.16%), Query Frame = 3 Query: 117 FGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQSWTAD 452 +GP TP++GG +K+ + + YP K P++ F++++FHPNI A G++CLD++ W+ +YD+ I S + LL PNP P N +AA M+ EY ++++E +++ T + Sbjct: 39 YGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYIQKYATEE 152
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC12_DROME (NEDD8-conjugating enzyme Ubc12 OS=Drosophila melanogaster GN=CG7375 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.051e-19 Identity = 43/139 (30.94%), Postives = 80/139 (57.55%), Query Frame = 3 Query: 9 ARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE 425 A+ R+ +D L P + P N ++ + +I PD+ + G F + +YP++PP V+ ++++HPNI DG++CL+IL+ W+P+ ++ +I+ +Q L +PNP P N EAA + N+R++ V++ Sbjct: 27 AQLRIQKDINELNL-PNTCATDFPDPNDLLNFKLII-SPDEGFYRDGRFVFNFRVGSNYPHEPPKVKCATQVYHPNIDLDGNVCLNILREDWNPVLNINSIVYGLQFLFLEPNPEDPLNKEAADVLQTNRRQFENNVKK 163
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC6_ARATH (Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6 PE=2 SV=2) HSP 1 Score: 94.3597 bits (233), Expect = 3.499e-19 Identity = 45/147 (30.61%), Postives = 84/147 (57.14%), Query Frame = 3 Query: 3 TPARKRLMRDFKRLQQDPPAGISGAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAILTS-IQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 437 +P+++R M K + D ++ + ++ GP D+ + GG +K+ ++ E YP K P+V FV++++HPN+ + G++CLD++ WSP++D+ + S + LL PNP+ P N EAA + ++ Y +V+E E+ Sbjct: 3 SPSKRREMDMMKLMMSDYKVDTV----NDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFNGEAASLLMRDRAAYELKVKEYCEK 145
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: Y1A1_ENCCU (Probable ubiquitin-conjugating enzyme E2 ECU01_1010 OS=Encephalitozoon cuniculi GN=ECU01_1010 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.570e-19 Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 3 Query: 72 GAPQDNSIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQ--------------NQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 437 G+ ++ +W+ D+ + G K ++F YP +PPT++FVS+MFHPNIY DG +C+ IL+ ++W+P+ ++ I+ SI +L PN +SPAN +A+ M+ +N EY + V I + Sbjct: 58 GSMENRDYKVWDIYFTLGGDSLYAGRILKAVMKFPSSYPLRPPTLKFVSKMFHPNIYEDGKMCISILEEDKQQDSSVFGDPKDKWTPVQNIRTIVMSIVVILNSPNISSPANVDASVMYRDNPEEYIKEVIRIARE 193
BLAST of CK939327 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 4.570e-19 Identity = 40/108 (37.04%), Postives = 70/108 (64.81%), Query Frame = 3 Query: 120 GPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREIVEQ 437 GP D+ ++GG +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA + ++ Y +RV+E E+ Sbjct: 38 GPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEK 145 The following BLAST results are available for this feature:
BLAST of CK939327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 256
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939327 ID=CK939327; Name=CK939327; organism=Citrus sinensis; type=EST; length=523bpback to top |