EY666003

Overview
NameEY666003
Unique NameEY666003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_MALGO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.056e-61
Identity = 110/173 (63.58%), Postives = 137/173 (79.19%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            R C  C   +A L+RPKT + +CR CF+ VFE E+HQ IV  QLF+ G+R+AIGASGGKDSTVLA+V+  LN R++YGL+LFLLSIDEGI+GYRDDSL+TVKRN+ QYG+PLK++ YK+LYGW+MD+IV  IG KNNCTFCG FR QALDR A+ +    I T HNA + A+T
Sbjct:    3 RECELCGTERAVLRRPKTGDLVCRACFFHVFETEVHQTIVEAQLFRRGDRVAIGASGGKDSTVLAYVMKTLNERYDYGLNLFLLSIDEGITGYRDDSLETVKRNQEQYGIPLKVLGYKELYGWSMDDIVASIGRKNNCTFCGVFRRQALDRGAASLGVDHIVTGHNADDMAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_XENLA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis GN=ctu1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.686e-61
Identity = 112/171 (65.50%), Postives = 135/171 (78.95%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            CS+C + +A L+RPKT   +C++CF+  FEEEIH  IV  +LF  GE++ IGASGGKDSTVLA V+  LN R+ YGLDL LLS+DEGISGYRDDSLQTVKRN+ QY LPLKIVSY +LYGWTMD+IVK +GLKNNCTFCG FR QALDR A ++   +I T HNA + A+T
Sbjct:    5 CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDSTVLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYGWTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DANRE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio rerio GN=ctu1 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.507e-61
Identity = 112/171 (65.50%), Postives = 134/171 (78.36%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            CS C Q++A LKRPKT   +C++CF+  FEEEIHQ I    LF  GE +AIGASGGKDSTVLA V+  LN R++YGL L LLS+DEGI+GYRDDSL+TVKRN+ QY LPLKIVSY++LYGWTMD IVK +GLKNNCTFCG FR QALDR A ++   +I T HNA + A+T
Sbjct:    5 CSNCEQKRAVLKRPKTGHSLCKDCFFWAFEEEIHQTITSAGLFNRGETVAIGASGGKDSTVLAHVMKLLNERYDYGLKLLLLSVDEGITGYRDDSLETVKRNQQQYELPLKIVSYEELYGWTMDAIVKQVGLKNNCTFCGVFRRQALDRGAMMLNVDKICTGHNADDVAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_SCHPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizosaccharomyces pombe GN=ncs6 PE=1 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.581e-61
Identity = 112/174 (64.37%), Postives = 138/174 (79.31%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  CN+R+ AL RPKT ++IC+ECFY VFE EIH VI+ N+LF  GER+ IGASGGKDSTVLA+V+  LN R++YGL+L+L+S+DEGI GYRDDSL TVKRN+ QYGLP+KIVSY DLY GWTMD +V  IG KNNCT+CG FR QALDR+A  +    + T HNA + A+T
Sbjct:    4 KLCQLCNERRPALVRPKTGQKICKECFYYVFETEIHNVIIENKLFVRGERVGIGASGGKDSTVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVKRNQQQYGLPMKIVSYADLYDGWTMDNVVARIGTKNNCTYCGVFRRQALDRAALSLDIHHLVTGHNADDIAET 177          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_CANGA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida glabrata GN=NCS6 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.741e-60
Identity = 110/173 (63.58%), Postives = 136/173 (78.61%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA L+RPK L++IC+ECFY VFE EIH  IV N LF+ GE++AIGASGGKDSTVLA +L  LN RH+YG+ L LLSIDEGI GYRDDSL TVKRN+ QY LPL+IVS++DLY WTMDEIV + G++N+CT+CG FR QALDR A+ +    + T HNA + A+T
Sbjct:   20 QLCELCHGRKAVLRRPKNLQKICKECFYYVFETEIHNTIVSNNLFQRGEKVAIGASGGKDSTVLAHILKLLNDRHDYGVKLVLLSIDEGIVGYRDDSLATVKRNQKQYQLPLEIVSFRDLYDWTMDEIVAIAGIRNSCTYCGVFRRQALDRGAAKLDINHVVTGHNADDMAET 192          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_PICGU (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia guilliermondii GN=NCS6 PE=3 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 3.878e-60
Identity = 111/182 (60.99%), Postives = 139/182 (76.37%), Query Frame = 1
Query:  235 ESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            E K +K    LC  C+Q KA +KRPK L+++C+ECFY VFE EIH  IV  QLFK G+++AIGASGGKDSTVLA VL  LN ++NYGL L LLSIDEGI GYRDDSL TVKRN+IQY +PL+I+SYKDLY W+MDEIV   G++++CT+CG  R QALDR A+ ++   + T HNA + A+T
Sbjct:    3 EKKIRKV--TLCDICHQSKAVMKRPKNLQKLCKECFYHVFETEIHNTIVDAQLFKPGDKVAIGASGGKDSTVLASVLKTLNEKYNYGLTLVLLSIDEGIVGYRDDSLATVKRNQIQYEMPLEIISYKDLYNWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLEIDHVVTGHNADDMAET 182          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_VANPO (Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 8.639e-60
Identity = 106/173 (61.27%), Postives = 137/173 (79.19%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA ++RPK L++IC+ CF+ VFE EIH+ IV N LF  GER+A+GASGGKDSTVLA+VL  LN RH+YG+++ LLSIDEGI GYRDDSL TVKRN+ QY LPL+I SY+DLY WTMD+IV+  G++N+CT+CG  R QALDR A+ ++ K + T HNA + A+T
Sbjct:   19 QLCELCHSRKAIIRRPKNLQKICKLCFFHVFETEIHETIVSNDLFYRGERVAVGASGGKDSTVLAYVLKLLNERHDYGIEIVLLSIDEGIVGYRDDSLATVKRNQQQYQLPLEIFSYQDLYDWTMDDIVETAGIRNSCTYCGVLRRQALDRGAAKLEIKHVVTGHNADDMAET 191          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_YARLI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowia lipolytica GN=NCS6 PE=3 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.283e-59
Identity = 110/172 (63.95%), Postives = 132/172 (76.74%), Query Frame = 1
Query:  265 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            LC  C  RKA LKRPKTL+ IC+ CFY VFE EIH  IV + LF  GER+AIGASGGKDSTVLA V+  LN R+NYG+D  LLSIDEGI GYRDDSL+TVKRN++QY + L++VSY +LYGW+MD+IV  IG KNNCT+CG FR QALDR ++ +    I T HNA + A+T
Sbjct:    2 LCVLCECRKAMLKRPKTLQPICKPCFYNVFETEIHNTIVESNLFFPGERVAIGASGGKDSTVLAHVMKTLNERYNYGVDFVLLSIDEGIHGYRDDSLETVKRNKVQYDMDLEVVSYSELYGWSMDQIVAQIGNKNNCTYCGVFRRQALDRGSAKLGIAHIVTGHNADDMAET 173          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_CANAL (Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida albicans GN=NCS6 PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 7.313e-59
Identity = 107/172 (62.21%), Postives = 132/172 (76.74%), Query Frame = 1
Query:  265 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            LC  C+ RKA +KRPK L ++C+ECFY +FE EIH  I+ N LF  GE+IAIGASGGKDSTVLA +L  LN R++YGL+L LLSIDEGI GYRDDSL TVKRN+ QY +PL+IVSYKDLY W+MDEIV   G++++CT+CG  R QALDR A  +  K + T HNA + A+T
Sbjct:   21 LCELCHGRKAVMKRPKNLMKLCKECFYNIFETEIHNTIISNDLFYRGEKIAIGASGGKDSTVLASILKTLNERYDYGLNLVLLSIDEGIKGYRDDSLATVKRNQKQYDMPLEIVSYKDLYNWSMDEIVACAGIRSSCTYCGVLRRQALDRGAEKLGIKHVVTGHNADDVAET 192          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_PICST (Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia stipitis GN=NCS6 PE=3 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 1.629e-58
Identity = 107/185 (57.84%), Postives = 140/185 (75.68%), Query Frame = 1
Query:  226 EVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            E++  K K +   LC  C+ RKA +KRPK L+++C++CFY+VFE EIH  IV  +LF  G+++AIGASGGKDSTVLA VL  LN R++YGL L LLSIDEGI GYRDDSL TVKRN++QY +PL+I+SY+DLY WTMDEIV   G++++CT+CG  R QALDR A+ +    + T HNA + A+T
Sbjct:    3 EISAKKVKVSA--LCELCHARKAVMKRPKNLQKLCKDCFYKVFETEIHNTIVDAKLFSPGDKVAIGASGGKDSTVLASVLKTLNERYDYGLILVLLSIDEGIKGYRDDSLATVKRNQVQYEMPLEIISYRDLYNWTMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAET 185          
The following BLAST results are available for this feature:
BLAST of EY666003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CTU1_MALGO2.056e-6163.58Cytoplasmic tRNA 2-thiolation protein 1 OS=Malasse... [more]
CTU1_XENLA2.686e-6165.50Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus... [more]
CTU1_DANRE3.507e-6165.50Cytoplasmic tRNA 2-thiolation protein 1 OS=Danio r... [more]
CTU1_SCHPO4.581e-6164.37Cytoplasmic tRNA 2-thiolation protein 1 OS=Schizos... [more]
CTU1_CANGA1.741e-6063.58Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida... [more]
CTU1_PICGU3.878e-6060.99Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]
CTU1_VANPO8.639e-6061.27Cytoplasmic tRNA 2-thiolation protein 1 OS=Vanderw... [more]
CTU1_YARLI3.283e-5963.95Cytoplasmic tRNA 2-thiolation protein 1 OS=Yarrowi... [more]
CTU1_CANAL7.313e-5962.21Cytoplasmic tRNA 2-thiolation protein 1 OS=Candida... [more]
CTU1_PICST1.629e-5857.84Cytoplasmic tRNA 2-thiolation protein 1 OS=Pichia ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666003 ID=EY666003; Name=EY666003; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCCCACGCGTCCGTGAGAAGGTCCAGAGACTTTGGAGGGG
TGAGGGTGCCGGTCGGACCGCTGCTTTCATAACAGTTCCATTCCGAGAAG
CTGTTGCCGCACTGCAAAAGCAAACTCAAATCTTCAATTTTTCCCTCATA
ACCCAAACTTGATCTCTTGTAAGTCTGTTAGCTTGTCTCTTCATAGTTTA
CTTAGTGGGCCATTAACCGTCAATGGAGGTCGCCGAGTCGAAGTCCAAGA
AGGCCGGTGGCCGCCTTTGTTCCACCTGTAACCAGAGAAAGGCTGCCCTC
AAACGACCTAAAACCCTAGAACAGATATGTAGGGAGTGTTTCTATGAGGT
ATTTGAGGAGGAGATCCACCAAGTCATTGTGGGCAATCAGCTATTCAAGG
CTGGTGAGCGTATTGCCATCGGCGCCTCTGGTGGAAAAGATTCCACTGTC
CTTGCTTTTGTGTTGTCAGAGCTGAACCGGCGTCACAACTATGGCCTTGA
TCTTTTCCTCCTATCAATTGATGAAGGCATTTCAGGATACAGGGATGATT
CACTTCAAACTGTCAAAAGAAATGAAATTCAGTATGGTCTGCCACTGAAG
ATTGTTTCATACAAGGATTTATATGGATGGACAATGGATGAGATAGTGAA
GGTGATCGGTTTAAAGAATAATTGCACCTTTTGTGGGGGTTTTCGCCCGC
AGGCCCTTGATCGAAGTGCTTCCTTGGTGAAAGGGAAACAGATTGCAACG
GAACATAATGCAAAGGAATTTGCGCAAACTGGCTAATGAAAATATGGCGA
GTGAAATTGCTAAATGAGTAAATGACATTGAAAAAAACTGGGAGAAAAGA
ACCGATCCAAGAAGCGACCTGTTAAGGCCCTTGAACGGAGAGGT
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