EY666003

Overview
NameEY666003
Unique NameEY666003
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_YEAST (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae GN=NCS6 PE=1 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 4.740e-58
Identity = 104/173 (60.12%), Postives = 135/173 (78.03%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT+CG FR Q+LDR A+ +    + T HNA + A+T
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAET 192          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_YEAS7 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae (strain YJM789) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.740e-58
Identity = 104/173 (60.12%), Postives = 135/173 (78.03%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT+CG FR Q+LDR A+ +    + T HNA + A+T
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAET 192          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_YEAS1 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Saccharomyces cerevisiae (strain RM11-1a) GN=NCS6 PE=3 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.740e-58
Identity = 104/173 (60.12%), Postives = 135/173 (78.03%), Query Frame = 1
Query:  262 RLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +LC  C+ RKA ++RPK L ++C++CF  VFE EIH  IV N LF+ GE++A+GASGGKDSTVLA +L  LN R++YG+++ LLSIDEGI GYRDDSL TVKRN+ QYGLPL+I S+KDLY WTMDEIV V G++N+CT+CG FR Q+LDR A+ +    + T HNA + A+T
Sbjct:   20 QLCELCHSRKALIRRPKNLSKLCKQCFCLVFETEIHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYRDDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNSCTYCGVFRRQSLDRGAAKLGISHVVTGHNADDMAET 192          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DEBHA (Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryomyces hansenii GN=NCS6 PE=3 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.056e-57
Identity = 108/188 (57.45%), Postives = 137/188 (72.87%), Query Frame = 1
Query:  217 PSMEVAESKSKKAGGRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            P  +VA  K K +   LC  CN RKA +KRPK L+++C+ECFY VFE EIH  I    LF+ G+++AIGASGGKDSTVLA VL  LN R++Y L+L LLSIDEGI GYRDDSL TVKRN+ QY + L+I+SYKDLY W+MDEIV   G++++CT+CG  R QALDR A+ +    + T HNA + A+T
Sbjct:    2 PEEKVATKKIKLSA--LCELCNGRKAVMKRPKNLQKLCKECFYNVFETEIHNTIADANLFQPGDKVAIGASGGKDSTVLASVLKTLNERYDYRLELVLLSIDEGIKGYRDDSLATVKRNQAQYNMALEIISYKDLYNWSMDEIVSCAGIRSSCTYCGVLRRQALDRGAAKLGINHVVTGHNADDMAET 187          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_ASPNC (Cytoplasmic tRNA 2-thiolation protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ncs6 PE=3 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.353e-57
Identity = 105/171 (61.40%), Postives = 128/171 (74.85%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            C+ C+ ++A + RPK  +++CR CF  VFE E+H+ I    LF  GER+AIGASGGKDSTVLA VL  LN R+NYGLDL LLSIDEGI GYRDDSL+TVKRN  QY +PL IVSY DLYGWTMD++V  +G K NCT+CG FR QALDR A+ +  K + T HNA + A+T
Sbjct:    6 CARCHDQRAVIIRPKNRQKLCRTCFLHVFETEVHETITSTSLFHPGERVAIGASGGKDSTVLAAVLKTLNERYNYGLDLCLLSIDEGIKGYRDDSLETVKRNAQQYNMPLVIVSYGDLYGWTMDQVVAQVGKKGNCTYCGVFRRQALDRGAAKLGIKHVVTGHNADDVAET 176          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DROGR (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila grimshawi GN=GH20281 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.073e-57
Identity = 107/171 (62.57%), Postives = 130/171 (76.02%), Query Frame = 1
Query:  268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            C      KAALKRPKT + +C++CF+  FE EIH  IV ++LF+ GE++A+ ASGGKDSTVLA V+  LN RH+YGLDL LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCTFCG FR QALDR A L+    IAT HNA + A+T
Sbjct:    5 CKAKCGNKAALKRPKTGDALCKDCFFAAFEAEIHHTIVSSRLFRRGEKVAVAASGGKDSTVLAHVMKLLNERHDYGLDLVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DROSE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila sechellia GN=GM20632 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.013e-57
Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 1
Query:  265 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +C +    +AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCTFCG FR QALDR A L+    IAT HNA + A+T
Sbjct:    4 ICKSKCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DROME (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila melanogaster GN=CG8078 PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.013e-57
Identity = 107/172 (62.21%), Postives = 130/172 (75.58%), Query Frame = 1
Query:  265 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            +C +    +AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCTFCG FR QALDR A L+    IAT HNA + A+T
Sbjct:    4 ICKSQCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DROER (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila erecta GN=GG10584 PE=3 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 5.241e-57
Identity = 109/170 (64.12%), Postives = 129/170 (75.88%), Query Frame = 1
Query:  271 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            S C  R AALKRPKT + +C+ECF+  FE EIH  I  + LF+ GE++A+ ASGGKDSTVLA VL  LN RHNYGL+L LLSIDEGI+GYRDDSL+TVK+N   Y +PLKI+SY++LYGWTMD IV  IG  NNCTFCG FR QALDR A L+    IAT HNA + A+T
Sbjct:    7 SQCGNR-AALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAET 175          
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_DROWI (Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosophila willistoni GN=GK22963 PE=3 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 6.845e-57
Identity = 109/170 (64.12%), Postives = 129/170 (75.88%), Query Frame = 1
Query:  271 STCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780
            S C  R A L+RPKT + +C+ECF+  FE EIH  I  NQLF+ G++IA+ ASGGKDSTVLA VL  LN +HNYGLDL LLSIDEGISGYRDDSL+TVK+N   Y + LKI+SY++LYGWTMD IV  IG  NNCTFCG FR QALDR A L++   IAT HNA + A+T
Sbjct:    7 SQCGNR-AVLRRPKTGDALCKECFFAAFEAEIHHTISSNQLFQPGQKIAVAASGGKDSTVLAHVLKLLNEKHNYGLDLVLLSIDEGISGYRDDSLETVKQNRDDYQMSLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLQVDSIATGHNADDIAET 175          
The following BLAST results are available for this feature:
BLAST of EY666003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CTU1_YEAST4.740e-5860.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_YEAS74.740e-5860.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_YEAS14.740e-5860.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Sacchar... [more]
CTU1_DEBHA1.056e-5757.45Cytoplasmic tRNA 2-thiolation protein 1 OS=Debaryo... [more]
CTU1_ASPNC2.353e-5761.40Cytoplasmic tRNA 2-thiolation protein 1 OS=Aspergi... [more]
CTU1_DROGR3.073e-5762.57Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROSE4.013e-5762.21Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROME4.013e-5762.21Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROER5.241e-5764.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]
CTU1_DROWI6.845e-5764.12Cytoplasmic tRNA 2-thiolation protein 1 OS=Drosoph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-011-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666003 ID=EY666003; Name=EY666003; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCCCACGCGTCCGTGAGAAGGTCCAGAGACTTTGGAGGGG
TGAGGGTGCCGGTCGGACCGCTGCTTTCATAACAGTTCCATTCCGAGAAG
CTGTTGCCGCACTGCAAAAGCAAACTCAAATCTTCAATTTTTCCCTCATA
ACCCAAACTTGATCTCTTGTAAGTCTGTTAGCTTGTCTCTTCATAGTTTA
CTTAGTGGGCCATTAACCGTCAATGGAGGTCGCCGAGTCGAAGTCCAAGA
AGGCCGGTGGCCGCCTTTGTTCCACCTGTAACCAGAGAAAGGCTGCCCTC
AAACGACCTAAAACCCTAGAACAGATATGTAGGGAGTGTTTCTATGAGGT
ATTTGAGGAGGAGATCCACCAAGTCATTGTGGGCAATCAGCTATTCAAGG
CTGGTGAGCGTATTGCCATCGGCGCCTCTGGTGGAAAAGATTCCACTGTC
CTTGCTTTTGTGTTGTCAGAGCTGAACCGGCGTCACAACTATGGCCTTGA
TCTTTTCCTCCTATCAATTGATGAAGGCATTTCAGGATACAGGGATGATT
CACTTCAAACTGTCAAAAGAAATGAAATTCAGTATGGTCTGCCACTGAAG
ATTGTTTCATACAAGGATTTATATGGATGGACAATGGATGAGATAGTGAA
GGTGATCGGTTTAAAGAATAATTGCACCTTTTGTGGGGGTTTTCGCCCGC
AGGCCCTTGATCGAAGTGCTTCCTTGGTGAAAGGGAAACAGATTGCAACG
GAACATAATGCAAAGGAATTTGCGCAAACTGGCTAATGAAAATATGGCGA
GTGAAATTGCTAAATGAGTAAATGACATTGAAAAAAACTGGGAGAAAAGA
ACCGATCCAAGAAGCGACCTGTTAAGGCCCTTGAACGGAGAGGT
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