EY666003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_LODEL (Cytoplasmic tRNA 2-thiolation protein 1 OS=Lodderomyces elongisporus GN=NCS6 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.832e-53 Identity = 104/193 (53.89%), Postives = 132/193 (68.39%), Query Frame = 1 Query: 229 VAESKSKKAG-GRLCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGER--------IAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 V S +KK LC C+ RKA +KRPK L ++C+ECF+ VFE E+H IV N+LF E +AIGASGGKDSTVLA V+ LN R+NYGL L LL IDEGI GYRD SL+TVK N+ +Y +PL+I+SYKDLY WTMDE+V G++++CT+CG R QALD+ A + I T HNA + A+T Sbjct: 2 VESSNTKKVKVSSLCELCHGRKAVMKRPKNLRKLCKECFFHVFETEVHNTIVENKLFANVENSEFPERRAVAIGASGGKDSTVLASVMKTLNERYNYGLKLVLLCIDEGIKGYRDHSLETVKMNQKEYDMPLEILSYKDLYDWTMDEVVSCAGIRSSCTYCGVLRRQALDKGAEKLGINHIVTGHNADDMAET 194
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_BOVIN (Cytoplasmic tRNA 2-thiolation protein 1 OS=Bos taurus GN=CTU1 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.484e-35 Identity = 77/176 (43.75%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIGLKNN----CTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 C++C++ +AAL+RP++ + +C CF FE E+ +V +L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y DL+ GWTMD + + CTFCG R +AL+ A LV + T HNA + A+T Sbjct: 6 CASCHKARAALRRPRSGQALCGSCFCAAFEAEVLHTVVAGRLLPPGAVVAVGASGGKDSTVLAHVLRELAPR--LGISLHLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYADLFGGWTMDAVARSTAGSGRSRACCTFCGVLRRRALEEGARLVGATHVVTGHNADDMAET 179
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_RAT (Cytoplasmic tRNA 2-thiolation protein 1 OS=Rattus norvegicus GN=Ctu1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35 Identity = 77/176 (43.75%), Postives = 112/176 (63.64%), Query Frame = 1 Query: 268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIG----LKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 C +C++ +AAL+RP++ + +C CF FE E+ + ++ L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+ GWTMD + + ++ CTFCG R +AL+ A LV I T HNA + A+T Sbjct: 6 CFSCHKARAALRRPRSGQALCGPCFCAAFEAEVLRTVLAGHLLPQGAVVAVGASGGKDSTVLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAET 179
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_MOUSE (Cytoplasmic tRNA 2-thiolation protein 1 OS=Mus musculus GN=Ctu1 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.639e-35 Identity = 77/176 (43.75%), Postives = 111/176 (63.07%), Query Frame = 1 Query: 268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIG----LKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 C +C++ +AAL+RP++ + +C CF FE E+ ++ L G +A+GASGGKDSTVLA VL EL R G+ L L+++DEGI GYRD +L+ V+ ++ LPL IV+Y+DL+ GWTMD + + ++ CTFCG R +AL+ A LV I T HNA + A+T Sbjct: 6 CFSCHKTRAALRRPRSGQALCGSCFCAAFEAEVLHTVLAGHLLPPGAVVAVGASGGKDSTVLAHVLRELAPR--LGITLHLVAVDEGIGGYRDAALEAVRSQAARWELPLTIVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGATHIVTGHNADDMAET 179
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: CTU1_HUMAN (Cytoplasmic tRNA 2-thiolation protein 1 OS=Homo sapiens GN=CTU1 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 2.369e-33 Identity = 75/176 (42.61%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 268 CSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLY-GWTMDEIVKVIG----LKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 C++C+ +AAL+RP + + +C CF FE E+ ++ +L G +A+GASGGKDSTVLA VL L R G+ L L+++DEGI GYRD +L V+R ++ LPL +V+Y+DL+ GWTMD + + ++ CTFCG R +AL+ A V I T HNA + A+T Sbjct: 6 CASCHAARAALRRPLSGQALCGACFCAAFEAEVLHTVLAGRLLPPGAVVAVGASGGKDSTVLAHVLRALAPR--LGISLQLVAVDEGIGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARRVGATHIVTGHNADDMAET 179
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: Y1157_METJA (CTU1/ATPBD3 family protein MJ1157 OS=Methanocaldococcus jannaschii GN=MJ1157 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.692e-20 Identity = 62/177 (35.03%), Postives = 95/177 (53.67%), Query Frame = 1 Query: 265 LCSTCNQRKAALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVK-----VIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHNAKEFAQT 780 LCS N+ A + + +C+ECF + E +V+ G + + +I IG SGGKDS V+A++L EL + H L +DEGI G+R+ + + VK +Y L LKI+ ++D G+T+DEIVK + + C+FCG R L++ A +A HN +F QT Sbjct: 39 LCSCGNE--AFYYQKYSNRHLCKECFKKDIERRAKKVL-GKDIIRNNVKIGIGISGGKDSLVMAYILKELFK-HIPNAKLICFFVDEGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDEIVKNDYLSKLNIGKPCSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQT 211
BLAST of EY666003 vs. ExPASy Swiss-Prot
Match: Y1478_METJA (CTU1/ATPBD3 family protein MJ1478 OS=Methanocaldococcus jannaschii GN=MJ1478 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.645e-13 Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 1 Query: 268 CSTCNQRK-AALKRPKTLEQICRECFYEVFEEEIHQVIVGNQLFKAGERIAIGASGGKDSTVLAFVLSELNRRHNYGLDLFLLSIDEGISGYRDDSLQTVKRNEIQYGLPLKIVSYKDLYGWTMDEIVKVIGLKNNCTFCGGFRPQALDRSASLVKGKQIATEHN 759 C C+++ LK PK +C+E F E FE ++ + I ++ E+I + SGGKD A+VL +L Y ++LF +++ GI G+ ++SL+ VK + +PL +V+ KD+ G TM++I C+ CG + +++ I T HN Sbjct: 7 CKFCDKKSYIKLKSPKMY--LCKEHFVEYFENKVKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLKKL----GYNIELFHINL--GIEGFSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDI-----RGKKCSICGTTKRYLMNKFGYENGFDVIVTGHN 158 The following BLAST results are available for this feature:
BLAST of EY666003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666003 ID=EY666003; Name=EY666003; organism=Citrus sinensis; type=EST; length=894bpback to top |