CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ERWCT (Fatty acid oxidation complex subunit alpha OS=Erwinia carotovora subsp. atroseptica GN=fadJ PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.672e-15 Identity = 57/190 (30.00%), Postives = 86/190 (45.26%), Query Frame = 2 Query: 2 ALPNNEKTHWGKPSQPLLNLLISENIVXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICG--EAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 A P EKT +L I + + + + + N L ++ + FE + ++ ++ S+ P F AGAD+ + S +E + TF + AL P +A I CD R+C E +LGLPE L ++PG+GGTQRLPRL+G A D+I TGR + A Sbjct: 11 ASPTTEKTS-------AFSLTIRPDNIGVISIDVPGERVNTLKSEFAEQILSVFELARQHATLRGLIFISAKPDSFIAGADITMLNKCSSAEQAENLAKQGQETFDQIAALPFPVVAAIHGACLGGGLELALACDYRVCSLDEKTVLGLPEVQLGLLPGSGGTQRLPRLIGLDSALDLILTGRHLRAGQA 193
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERE8 (Fatty acid oxidation complex subunit alpha OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadB PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15 Identity = 51/151 (33.77%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ F GAD+ E + P ++H ++ F+ LE L +PTIA I+ D R+ A +GLPET L I+PG GG+ RLPRL+G A +II G+ + KDA Sbjct: 29 NKLDTQTVANLGEALVVLEKQSELKGLLLRSA-KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCECILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_BACSU (Probable enoyl-CoA hydratase OS=Bacillus subtilis GN=fadB PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15 Identity = 56/170 (32.94%), Postives = 78/170 (45.88%), Query Frame = 2 Query: 74 NIVXINTSQF------HEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N + + QF H NAL + +L L + D+ ++I + FSAGAD+KE + +E + +E+ P IA I C +RI E A LGLPE L IIPG GTQRLPR VG + A ++I +G +SGK+A Sbjct: 2 NAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSIIIHGE-GRFFSAGADIKEFTSLKGNEDSSLLAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKALELIGSGEPISGKEA 170
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPY (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPS (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPP (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis (strain Pestoides F) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPN (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPG (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Angola) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPE (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_YERPB (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=fadB PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.264e-15 Identity = 51/151 (33.77%), Postives = 77/151 (50.99%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQM---SPSEIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L T + L A + + S +++RS+ + GAD+ E + P ++H ++ + F+ LE L +PTI+ I+ D RI A +GLPET L I+PG GG+ RLPRL+G A +II TG+ V+ DA Sbjct: 29 NKLDTKTVANLGEALNVLEKQSELKGLLLRSAKTALI-VGADITEFLSLFNAPPEKLHQWLVFANTIFNRLEDLPVPTISAINGYALGGGCECILATDFRIASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIATGKDVTANDA 178 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |