CK939288
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADB_SHEB9 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS195) GN=fadB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12 Identity = 49/151 (32.45%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE---IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N + L L A ++I +DS+ +++ SS F GAD+ E + + + +V + F+ LE L PT + I D R+ A +GLPET L IIPG GGT RLPR++G A + I TG+ +DA Sbjct: 29 NKFDRETLASLDAALDSIKQDSNIKALVLTSS-KDTFIVGADITEFLGLFAQDDAVLLSWVEQANAVFNKLEDLPFPTASAIKGFALGGGCETILATDFRVADTTAKIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRAEDA 178
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHIFL (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHIF8 (Fatty acid oxidation complex subunit alpha OS=Shigella flexneri serotype 5b (strain 8401) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEINALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_SHIB3 (Fatty acid oxidation complex subunit alpha OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 46/151 (30.46%), Postives = 69/151 (45.70%), Query Frame = 2 Query: 119 NALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPSE-IHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 N L + + + F+ + S +++ S P F AGAD+ E + FS + +P +A I C R+C + LGLPE L ++PG+GGTQRLPRL+G S A DI+ TG+++ K A Sbjct: 44 NTLKAEFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADISMIAGCKTKEDARDLAEKGQKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQA 194
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOUT (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain UTI89 / UPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 IRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSM (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGEAA--LLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + E+ V+ S+ P F AGAD+ + E + + + AL +P IA I C R+C + A +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 LRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLC (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/164 (29.88%), Postives = 76/164 (46.34%), Query Frame = 2 Query: 80 VXINTSQFHEYQKNALGTDMLRGL*HAFETISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 + I T + + N L + + + + E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 16 IAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179
BLAST of CK939288 vs. ExPASy Swiss-Prot
Match: FADJ_ECOK1 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O1:K1 / APEC GN=fadJ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 46/134 (34.33%), Postives = 66/134 (49.25%), Query Frame = 2 Query: 170 ISEDSSANVVMIRSSVPKVFSAGADLKERRQMSPS-EIHFYVNTLRSTFSFLEALRIPTIAVIDXXXXXXXXXXXXXCDLRICGE--AALLGLPETGLAIIPGAGGTQRLPRLVGKSVAKDIIFTGRKVSGKDA 562 I E+ V+ S+ P F AGAD+ + E + + + AL IP IA I C R+C + +LGLPE L ++PG+GGTQRLPRL+G S A ++I TG+++ K A Sbjct: 46 IRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQA 179 The following BLAST results are available for this feature:
BLAST of CK939288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 205
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939288 ID=CK939288; Name=CK939288; organism=Citrus sinensis; type=EST; length=563bpback to top |