CN188114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A1_CANAL (Histone H2A.1 OS=Candida albicans GN=HTA1 PE=3 SV=3) HSP 1 Score: 128.642 bits (322), Expect = 3.254e-29 Identity = 66/105 (62.86%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGL FPVGR+ R L+KG Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLPKKS Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKS 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A_CAIMO (Histone H2A OS=Cairina moschata PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_RAT (Histone H2A.J OS=Rattus norvegicus GN=H2afj PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_MOUSE (Histone H2A.J OS=Mus musculus GN=H2afj PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_MACFA (Histone H2A.J OS=Macaca fascicularis GN=H2AFJ PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_HUMAN (Histone H2A.J OS=Homo sapiens GN=H2AFJ PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_CHICK (Histone H2A.J OS=Gallus gallus GN=H2A-IX PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AJ_BOVIN (Histone H2A.J OS=Bos taurus GN=H2AFJ PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 65/105 (61.90%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS K GLQFPVGRI R+LK G+Y++RVG GAP GNAARDNKK RI+PRH+ LAVRNDEEL KLL G TIA GGV+PNI+ LLPKK+ Sbjct: 18 SRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKA 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A4_CHICK (Histone H2A-IV OS=Gallus gallus PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.249e-29 Identity = 66/105 (62.86%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L+KG Y++RVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKKT 121 The following BLAST results are available for this feature:
BLAST of CN188114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188114 ID=CN188114; Name=CN188114; organism=Citrus sinensis; type=EST; length=723bpback to top |