CN188114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A_ASPNG (Histone H2A OS=Aspergillus niger GN=httA PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGL FPVGR+ R L+KG Y+QRVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLPKK+ Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A_ASPNC (Histone H2A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=httA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGL FPVGR+ R L+KG Y+QRVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLPKK+ Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGL FPVGR+ R L+KG Y+QRVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLPKK+ Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 66/105 (62.86%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGL FPVGR+ R L+KG Y+QRVG GAP GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLPKK+ Sbjct: 18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKT 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A1_PICGU (Histone H2A.1 OS=Pichia guilliermondii GN=HTA1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 66/104 (63.46%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 516 SRS KAGL FPVGRI R L+KG Y+QRVG+GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLP K Sbjct: 17 SRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPSK 120
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A1F_RAT (Histone H2A type 1-F OS=Rattus norvegicus PE=3 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 2.109e-28 Identity = 65/105 (61.90%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 +RS +AGLQFPVGR+ R L+KG YS+RVG GAP NAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 TRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAANAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A2_CANGA (Histone H2A.2 OS=Candida glabrata GN=HTA2 PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.754e-28 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 +RS KAGL FPVGR+ R L++G Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPKKS Sbjct: 18 TRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKS 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A1_CANGA (Histone H2A.1 OS=Candida glabrata GN=HTA1 PE=3 SV=3) HSP 1 Score: 125.561 bits (314), Expect = 2.754e-28 Identity = 63/105 (60.00%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 +RS KAGL FPVGR+ R L++G Y+QR+G+GAP GNAARDNKK+RIIPRH+ LA+RND+EL KLL VTIA GGVLPNI+ LLPKKS Sbjct: 18 TRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKS 122
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A4_RAT (Histone H2A type 4 OS=Rattus norvegicus PE=2 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28 Identity = 63/105 (60.00%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS +AGLQFPVGR+ R L++G Y++R+G G P GNAARDNKK RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI VLLPKK+ Sbjct: 17 SRSFRAGLQFPVGRVHRLLRQGNYAERIGAGTPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKKT 121
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2A2_PICST (Histone H2A.2 OS=Pichia stipitis GN=HTA2 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.597e-28 Identity = 65/104 (62.50%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKK 516 SRS KAGL FPVGR+ R L+KG Y+QRVG+GAP GNAARDNKK+RIIPRH+ LA+RNDEEL KLL VTIA GGVLPNI+ LLP K Sbjct: 17 SRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAK 120 The following BLAST results are available for this feature:
BLAST of CN188114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188114 ID=CN188114; Name=CN188114; organism=Citrus sinensis; type=EST; length=723bpback to top |