CN188114
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_YARLI (Histone H2A.Z OS=Yarrowia lipolytica GN=HTZ1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16 Identity = 52/104 (50.00%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGRI RY+KK ++ RVG A GNAARD K RI PRH+ LA+R DEEL L+ TIA+GGV+P+IN LL K Sbjct: 31 SHSSRAGLQFPVGRIKRYMKKSVQNKVRVGAKAAIYIAAVLEYLTAEVLELAGNAARDLKVKRITPRHLQLAIRGDEELDTLIQ-ATIAYGGVMPHINKALLLK 133
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_PICST (Histone H2A.Z OS=Pichia stipitis GN=HTZ1 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16 Identity = 51/104 (49.04%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGRI RYLK+ ++ RVG+ + GNAA+D K RI PRH+ LA+R DEEL L+ TIA+GGVLP+IN LL K Sbjct: 23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIK-ATIAYGGVLPHINKALLLK 125
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_ASHGO (Histone H2A.Z OS=Ashbya gossypii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16 Identity = 52/104 (50.00%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGRI RYLKK + RVG+ A GNAA+D K RI PRH+ LA+R D+EL L+ TIA GGVLP+IN LL K Sbjct: 24 SHSARAGLQFPVGRIKRYLKKNAAGKTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIR-ATIASGGVLPHINKALLLK 126
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AV_TETTH (Histone H2A.Z OS=Tetrahymena thermophila GN=HTA3 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16 Identity = 55/107 (51.40%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYS--QRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKS 519 SRS KAGLQFPVGRI R+LK GR S RVG A GNA++D K RI PRH+LLA+R DEEL +L TIA GGV+P+I+ LL K S Sbjct: 29 SRSYKAGLQFPVGRIHRFLK-GRVSAKNRVGATAAVYAAAILEYLTAEVLELAGNASKDFKVRRITPRHLLLAIRGDEEL-DILIKATIAGGGVIPHIHKALLGKHS 133
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_DEBHA (Histone H2A.Z OS=Debaryomyces hansenii GN=HTZ1 PE=3 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16 Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGRI RYLK+ ++ RVG+ + GNAA+D K RI PRH+ LA+R DEEL L+ TIA GGVLP+IN LL K Sbjct: 23 SHSARAGLQFPVGRIKRYLKRTAQNKIRVGSKSAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDNLIK-ATIAFGGVLPHINKALLLK 125
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_KLULA (Histone H2A.Z OS=Kluyveromyces lactis GN=HTZ1 PE=3 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15 Identity = 50/104 (48.08%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGR+ RYLK+ + RVG+ A GNAA+D K RI PRH+ LA+R D+EL L+ TIA GGVLP+IN LL K Sbjct: 24 SHSARAGLQFPVGRVKRYLKRNAAGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIR-ATIASGGVLPHINKALLLK 126
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_YEAST (Histone H2A.Z OS=Saccharomyces cerevisiae GN=HTZ1 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15 Identity = 51/104 (49.04%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFPVGRI RYLK+ + RVG+ A GNAA+D K RI PRH+ LA+R D+EL L+ TIA GGVLP+IN LL K Sbjct: 24 SSSARAGLQFPVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDDELDSLIR-ATIASGGVLPHINKALLLK 126
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_GIBZE (Histone H2A.Z OS=Gibberella zeae GN=HTZ1 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.561e-15 Identity = 49/104 (47.12%), Postives = 60/104 (57.69%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKG-RYSQRVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S +AGLQFP GR+ R+LK+ + RVG A GNAA+D K RI PRH+ LA+R DEEL L+ TIA+GGVLP+IN LL K Sbjct: 30 SHSARAGLQFPCGRVKRFLKQNTQQKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIR-ATIAYGGVLPHINRALLLK 132
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_COCIM (Histone H2A.Z OS=Coccidioides immitis GN=HTZ1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.957e-15 Identity = 51/104 (49.04%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S KAGLQFP GRI R+LK ++ RVG A GNAA+D K RI PRH+ LA+R DEEL L+ TIA GGVLP IN LL K Sbjct: 25 SHSAKAGLQFPCGRIKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIR-ATIAFGGVLPRINRALLLK 127
BLAST of CN188114 vs. ExPASy Swiss-Prot
Match: H2AZ_NEOFI (Histone H2A.Z OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=htz1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15 Identity = 50/104 (48.08%), Postives = 58/104 (55.77%), Query Frame = 1 Query: 205 SRSVKAGLQFPVGRIGRYLKKGRYSQ-RVGTGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPK 513 S S KAGLQFP GR+ R+LK ++ RVG A GNAA+D K RI PRH+ LA+R DEEL L+ TIA GGVLP IN LL K Sbjct: 25 SHSAKAGLQFPCGRVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLIR-ATIAFGGVLPRINRALLLK 127 The following BLAST results are available for this feature:
BLAST of CN188114 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 238
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188114 ID=CN188114; Name=CN188114; organism=Citrus sinensis; type=EST; length=723bpback to top |